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Commit 2fec6d35 authored by Web Admin's avatar Web Admin
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removed warn

parent c17771a3
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......@@ -1825,30 +1825,29 @@ sub _mask_features {
=cut
sub get_all_SearchFeatures {
my $self = shift;
my $ticket = shift;
local $_;
unless($ticket) {
throw("ticket argument is required");
}
my $self = shift;
my $ticket = shift;
local $_;
unless($ticket) {
throw("ticket argument is required");
}
if(!$self->adaptor()) {
warning("Cannot get SearchFeatures without an attached adaptor");
return [];
}
if(!$self->adaptor()) {
warning("Cannot get SearchFeatures without an attached adaptor");
return [];
}
my $sfa = $self->adaptor()->db()->get_db_adaptor('blast');
my $sfa = $self->adaptor()->db()->get_db_adaptor('blast');
my $offset = $self->start-1;
my $offset = $self->start-1;
my $features = $sfa ? $sfa->get_all_SearchFeatures($ticket, $self->chr_name, $self->start, $self->end) : [];
my $features = $sfa ? $sfa->get_all_SearchFeatures($ticket, $self->chr_name, $self->start, $self->end) : [];
foreach( @$features ) {
$_->start( $_->start-$offset );
$_->end( $_->end-$offset );
};
return $features;
foreach( @$features ) {
$_->start( $_->start - $offset );
$_->end( $_->end - $offset );
};
return $features;
}
=head2 get_all_AssemblyExceptionFeatures
......
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