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Commit 300c2e8d authored by Glenn Proctor's avatar Glenn Proctor
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Tweak to GO job naming. Updated for release 44.

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...@@ -4,13 +4,13 @@ use strict; ...@@ -4,13 +4,13 @@ use strict;
# Remember to check/set the various config optons # Remember to check/set the various config optons
# ------------------------------ config ------------------------------- # ------------------------------ config -------------------------------
my $release = 43; my $release = 44;
my $base_dir = "/lustre/work1/ensembl/gp1/projections/"; my $base_dir = "/lustre/work1/ensembl/gp1/projections/";
my $conf = "release_43.conf"; # registry config file my $conf = "release_44.conf"; # registry config file
my $compara = "ensembl_compara_43"; # name in registry file my $compara = "ensembl_compara_44"; # name in registry file
# -------------------------- end of config ---------------------------- # -------------------------- end of config ----------------------------
...@@ -60,7 +60,7 @@ $opts .= " -nobackup"; ...@@ -60,7 +60,7 @@ $opts .= " -nobackup";
foreach my $to ("mouse", "rat", "dog", "chicken", "cow") { foreach my $to ("mouse", "rat", "dog", "chicken", "cow") {
$o = "$dir/go_human_$to.out"; $o = "$dir/go_human_$to.out";
$e = "$dir/go_human_$to.err"; $e = "$dir/go_human_$to.err";
$n = substr("g_hum_to", 0, 10); $n = substr("g_hum_$to", 0, 10);
system "bsub -o $o -e $e -J $n perl project_display_xrefs.pl $opts -from human -to $to -go_terms -delete_go_terms"; system "bsub -o $o -e $e -J $n perl project_display_xrefs.pl $opts -from human -to $to -go_terms -delete_go_terms";
} }
......
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