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Commit 35e2a7f1 authored by Ian Longden's avatar Ian Longden
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added method with cutoff of 90 percent (primarily for xenoupus)

parent d04853bc
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package XrefMapper::Methods::ExonerateGappedBest_90_perc_id;
use XrefMapper::Methods::ExonerateBasic;
use vars '@ISA';
@ISA = qw{XrefMapper::Methods::ExonerateBasic};
sub options {
return ('--model', 'affine:local', '--subopt', 'no', '--bestn', '1');
}
sub query_identity_threshold {
return 90;
}
sub target_identity_threshold {
return 90;
}
1;
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