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Commit 3c2ff074 authored by Glenn Proctor's avatar Glenn Proctor
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Use all sources when projecting names from species other than human.

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misc-scripts/xref_projection/submit_projections.pl
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...@@ -134,8 +134,9 @@ foreach my $pair (@names_1_1) { ...@@ -134,8 +134,9 @@ foreach my $pair (@names_1_1) {
$o = "$dir/names_${from}_$to.out"; $o = "$dir/names_${from}_$to.out";
$e = "$dir/names_${from}_$to.err"; $e = "$dir/names_${from}_$to.err";
$n = substr("n_${from}_$to", 0, 10); # job name display limited to 10 chars $n = substr("n_${from}_$to", 0, 10); # job name display limited to 10 chars
my $all = ($from eq "human") ? "" : "--all_sources"; # non-human from species -> use all sources
print "Submitting name projection from $from to $to\n"; print "Submitting name projection from $from to $to\n";
system "bsub $bsub_opts -o $o -e $e -J $n perl project_display_xrefs.pl $script_opts -from $from -to $to -names -delete_names -no_database"; system "bsub $bsub_opts -o $o -e $e -J $n perl project_display_xrefs.pl $script_opts -from $from -to $to -names -delete_names -no_database $all";
} }
# 1:many # 1:many
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