Removed unnecessary masking step in subseq. Masking was being run twice.

43883eb2 · Kieron Taylor · ea8fc340 · 43883eb2
Commit 43883eb2 authored 13 years ago by Kieron Taylor
--- a/modules/Bio/EnsEMBL/RepeatMaskedSlice.pm
+++ b/modules/Bio/EnsEMBL/RepeatMaskedSlice.pm
@@ -299,7 +299,6 @@ sub subseq {
  # mask the dna
  #
  my $dna = $subsequence_slice->seq();
-  $subsequence_slice->_mask_features(\$dna,\@repeats,$soft_mask,$not_default_masking_cases);
  return $dna;
 }