updated web_data for BACends, added FOSends

misc-scripts/analysis_description/analysis.descriptions

@@ -3,7 +3,7 @@
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 1	ARRAY_LIV_GAMDETOX_0.25k_v1	Vectorbase probe alignments: LIV_GAMDETOX_0.25k_v1	OLIGO LIV_GAMDETOX_0.25k_v1	1	
 2	VirginiaTech_Insect_TE	Transposable elements (TE) catalogued by Jake Tu, Virginia Tech	VirginiaTech Insect TE	1	
-3	BACends	Bacterial Artificial Chromosome (end sequences) of library clones that were used in the sequencing project are aligned to the genome using <a rel="external" href="http://www.sanger.ac.uk/Software/analysis/SSAHA2/">SSAHA2</a>.	BAC ends	1	 {'default' => {'contigviewbottom' => 'gene_label','contigviewtop' => 'gene_label','cytoview' => 'gene_label'}}
+3	BACends	Bacterial Artificial Chromosome (end sequences) of library clones that were used in the sequencing project are aligned to the genome using <a rel="external" href="http://www.sanger.ac.uk/Software/analysis/SSAHA2/">SSAHA2</a>.	BAC ends	1	 {'default' => {'contigviewbottom' => 'gene_label','contigviewtop' => 'gene_label','cytoview' => 'gene_label'}, 'show_strands' => '1'}
 4	BlastmiRNA	Positions of miRNAs along the genome are shown.  A BLASTN of genomic sequence regions against <a rel="external" href="http://microrna.sanger.ac.uk">miRBase</a> sequences is performed, and hits are clustered and filtered by E value. Aligned genomic sequence is then checked for possible secondary structure using RNAFold. If evidence is found that the genomic sequence could form a stable hairpin structure the locus is used to create a miRNA gene model. The resulting BLAST hit is used as supporting evidence for the miRNA gene.  See <a href="/info/docs/genebuild/ncrna.html" class="cp-external">article</a>.	miRBase miRNA	1	{'type'=>'rna'}
 5	other_protein	For various species, proteins from <a rel="external" href="http://uniprot.org">UniProtKB</a> are aligned to the genome with <a rel="external" href="http://genome.cshlp.org/cgi/content/abstract/14/5/988?maxtoshow=&amp;HITS=10&amp;hits=10&amp;RESULTFORMAT=&amp;andorexactfulltext=and&amp;searchid=1&amp;FIRSTINDEX=0&amp;sortspec=relevance&amp;volume=14&amp;firstpage=988&amp;resourcetype=HWCIT">GeneWise</a>.	Other sp. prot.	1	
 6	cint_cdna	Ciona intestinalis cDNA sequences from the <a rel="external" href="http://ghost.zool.kyoto-u.ac.jp/indexr1.html">Ghost Database</a> are aligned to the genome using <a rel="external" href="http://www.biomedcentral.com/1471-2105/6/31">Exonerate</a>.	C.intestinalis cDNA	1	 {'default' => {'contigviewbottom' => 'stack'},'type' => 'cdna'}
@@ -330,3 +330,4 @@
 327	PseudoGeneDensity	Density of Vega pseudogenes	Genes (density)	1
 328	IGGeneDensity	Density of Vega IG genes	Genes (density)	1
 329	TECGeneDensity	Density of Vega TEC genes	Genes (density)	1
+330	FOSends	End sequences of Fosmid library clones used in the sequencing project aligned to the genome using <a rel="external" href="http://www.sanger.ac.uk/Software/analysis/SSAHA2/">SSAHA2</a>.	FOS ends	1	{'default' => {'contigviewbottom' => 'gene_label','contigviewtop' => 'gene_label','cytoview' => 'gene_label'}, 'show_strands' => '1'}