Merge multispecies-core-dev development branch into HEAD.
Using this code on databases not patched up to the v51 schema will fail. A pre-merge tag was put in place just before this merge: pre-multispecies-merge (in ensembl/modules/Bio/EnsEMBL)
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- modules/Bio/EnsEMBL/DBSQL/AffyArrayAdaptor.pm 10 additions, 2 deletionsmodules/Bio/EnsEMBL/DBSQL/AffyArrayAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/AffyFeatureAdaptor.pm 9 additions, 2 deletionsmodules/Bio/EnsEMBL/DBSQL/AffyFeatureAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/AffyProbeAdaptor.pm 9 additions, 2 deletionsmodules/Bio/EnsEMBL/DBSQL/AffyProbeAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/AssemblyExceptionFeatureAdaptor.pm 20 additions, 5 deletionsmodules/Bio/EnsEMBL/DBSQL/AssemblyExceptionFeatureAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/AssemblyMapperAdaptor.pm 13 additions, 5 deletionsmodules/Bio/EnsEMBL/DBSQL/AssemblyMapperAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/BaseAdaptor.pm 53 additions, 26 deletionsmodules/Bio/EnsEMBL/DBSQL/BaseAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/BaseFeatureAdaptor.pm 13 additions, 5 deletionsmodules/Bio/EnsEMBL/DBSQL/BaseFeatureAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/BaseMetaContainer.pm 157 additions, 43 deletionsmodules/Bio/EnsEMBL/DBSQL/BaseMetaContainer.pm
- modules/Bio/EnsEMBL/DBSQL/CoordSystemAdaptor.pm 143 additions, 99 deletionsmodules/Bio/EnsEMBL/DBSQL/CoordSystemAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/DBAdaptor.pm 48 additions, 27 deletionsmodules/Bio/EnsEMBL/DBSQL/DBAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/DBEntryAdaptor.pm 32 additions, 10 deletionsmodules/Bio/EnsEMBL/DBSQL/DBEntryAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/DensityTypeAdaptor.pm 8 additions, 2 deletionsmodules/Bio/EnsEMBL/DBSQL/DensityTypeAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm 75 additions, 62 deletionsmodules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/MetaCoordContainer.pm 18 additions, 9 deletionsmodules/Bio/EnsEMBL/DBSQL/MetaCoordContainer.pm
- modules/Bio/EnsEMBL/DBSQL/MiscFeatureAdaptor.pm 48 additions, 35 deletionsmodules/Bio/EnsEMBL/DBSQL/MiscFeatureAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/MiscSetAdaptor.pm 4 additions, 1 deletionmodules/Bio/EnsEMBL/DBSQL/MiscSetAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/OligoProbeAdaptor.pm 6 additions, 3 deletionsmodules/Bio/EnsEMBL/DBSQL/OligoProbeAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/PredictionExonAdaptor.pm 3 additions, 2 deletionsmodules/Bio/EnsEMBL/DBSQL/PredictionExonAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/SequenceAdaptor.pm 17 additions, 17 deletionsmodules/Bio/EnsEMBL/DBSQL/SequenceAdaptor.pm
- modules/Bio/EnsEMBL/DBSQL/SliceAdaptor.pm 249 additions, 184 deletionsmodules/Bio/EnsEMBL/DBSQL/SliceAdaptor.pm
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