load_regulatory.pl

misc-scripts/regulatory_regions/load_regulatory.pl

@@ -125,13 +125,11 @@ while (<FILE>) {
   # for miRNA_target (and possibly others) where individual features don't
   # have a unique name, create a composite one. Also set influence for each type.
   my $feature_name;
-  my $influence;
   if ($feature =~ /miRNA_target/i) {
     $feature_name = $id .":" . $seq;
-    $influence = 'negative';
   }
 
-  print STDERR "No feature name for $seq of type $feature on $id. Also can't set influence\n" if (!$feature_name);
+  print STDERR "No feature name for $seq of type $feature on $id.\n" if (!$feature_name);
 
   my $seq_region_id = $slice_adaptor->get_seq_region_id($chr_slice);
 
@@ -151,7 +149,6 @@ while (<FILE>) {
     $rr_obj_sth->execute($rr_id,
 			 $ensembl_type,
 			 $ensembl_object->dbID(),
-			 $influence,
 			 "");                     # no evidence yet
 
     $count++;