[ENSCORESW-262]. Customised the Exon summary as hash, gene and transcript...
[ENSCORESW-262]. Customised the Exon summary as hash, gene and transcript summaries have been improved. Biotype mapper can ask objects for their SO term and knows Variation objects are already annotated with a code. BioType mapper caches SO retrieval so it is a massive speed increase for large result sets.
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- modules/Bio/EnsEMBL/Exon.pm 19 additions, 0 deletionsmodules/Bio/EnsEMBL/Exon.pm
- modules/Bio/EnsEMBL/Gene.pm 1 addition, 0 deletionsmodules/Bio/EnsEMBL/Gene.pm
- modules/Bio/EnsEMBL/Transcript.pm 2 additions, 1 deletionmodules/Bio/EnsEMBL/Transcript.pm
- modules/Bio/EnsEMBL/Utils/BiotypeMapper.pm 46 additions, 12 deletionsmodules/Bio/EnsEMBL/Utils/BiotypeMapper.pm
- modules/Bio/EnsEMBL/Utils/IO/GFFSerializer.pm 8 additions, 4 deletionsmodules/Bio/EnsEMBL/Utils/IO/GFFSerializer.pm
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