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ensembl-gh-mirror
ensembl
Commits
65b327a6
Commit
65b327a6
authored
Jun 03, 2016
by
Magali Ruffier
Browse files
Revert "update to EBI copyright"
This reverts commit
3e24194c
.
parent
3e24194c
Changes
892
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20 changed files
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21 additions
and
42 deletions
+21
-42
LICENSE
LICENSE
+1
-2
misc-scripts/CopyDBoverServer.pl
misc-scripts/CopyDBoverServer.pl
+1
-2
misc-scripts/CreateFile4CopyDBoverServer.pl
misc-scripts/CreateFile4CopyDBoverServer.pl
+1
-2
misc-scripts/alt_alleles/alt_alleles.pl
misc-scripts/alt_alleles/alt_alleles.pl
+1
-2
misc-scripts/annual_copyright_updater.sh
misc-scripts/annual_copyright_updater.sh
+2
-4
misc-scripts/assembly/AssemblyMapper/BlastzAligner.pm
misc-scripts/assembly/AssemblyMapper/BlastzAligner.pm
+1
-2
misc-scripts/assembly/EXAMPLE.use_mapping.pl
misc-scripts/assembly/EXAMPLE.use_mapping.pl
+1
-2
misc-scripts/assembly/align_by_clone_identity.pl
misc-scripts/assembly/align_by_clone_identity.pl
+1
-2
misc-scripts/assembly/align_nonident_regions.pl
misc-scripts/assembly/align_nonident_regions.pl
+1
-2
misc-scripts/assembly/align_nonident_regions_wrapper.pl
misc-scripts/assembly/align_nonident_regions_wrapper.pl
+1
-2
misc-scripts/assembly/check_mapping.pl
misc-scripts/assembly/check_mapping.pl
+1
-2
misc-scripts/assembly/cleanup_tmp_tables.sql
misc-scripts/assembly/cleanup_tmp_tables.sql
+1
-2
misc-scripts/assembly/compare_assemblies.pl
misc-scripts/assembly/compare_assemblies.pl
+1
-2
misc-scripts/assembly/conservation_statistics.pl
misc-scripts/assembly/conservation_statistics.pl
+1
-2
misc-scripts/assembly/ensembl_assembly_to_chain.pl
misc-scripts/assembly/ensembl_assembly_to_chain.pl
+1
-2
misc-scripts/assembly/exon_conservation_check.pl
misc-scripts/assembly/exon_conservation_check.pl
+1
-2
misc-scripts/assembly/find_overlaps.pl
misc-scripts/assembly/find_overlaps.pl
+1
-2
misc-scripts/assembly/fix_asm_overlaps.pl
misc-scripts/assembly/fix_asm_overlaps.pl
+1
-2
misc-scripts/assembly/fix_cmp_overlaps.pl
misc-scripts/assembly/fix_cmp_overlaps.pl
+1
-2
misc-scripts/assembly/fix_overlaps.pl
misc-scripts/assembly/fix_overlaps.pl
+1
-2
No files found.
LICENSE
View file @
65b327a6
...
...
@@ -186,8 +186,7 @@
same "printed page" as the copyright notice for easier
identification within third-party archives.
Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright [2016] EMBL-European Bioinformatics Institute
Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
...
...
misc-scripts/CopyDBoverServer.pl
View file @
65b327a6
#!/usr/bin/env perl
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
# Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
misc-scripts/CreateFile4CopyDBoverServer.pl
View file @
65b327a6
#!/usr/bin/env perl
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
# Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
misc-scripts/alt_alleles/alt_alleles.pl
View file @
65b327a6
#!/usr/bin/env perl
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
# Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
misc-scripts/annual_copyright_updater.sh
View file @
65b327a6
#!/bin/bash
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016] EMBL-European Bioinformatics Institute
# Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
@@ -35,8 +34,7 @@ for var in $dirs; do
last_year
=
$((
$year
-
1
))
search
=
"
\\
[1999-[0-9]*
\\
] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute"
replacement
=
"[1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright [2016] EMBL-European Bioinformatics Institute
\n
Copyright [2016] EMBL-European Bioinformatics Institute"
replacement
=
"[1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
\n
Copyright [2016] EMBL-European Bioinformatics Institute"
echo
"About to scan
$(
pwd
)
for files to replace '
$search
' with '
$replacement
'"
...
...
misc-scripts/assembly/AssemblyMapper/BlastzAligner.pm
View file @
65b327a6
=head1 LICENSE
Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright [2016] EMBL-European Bioinformatics Institute
Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
...
...
misc-scripts/assembly/EXAMPLE.use_mapping.pl
View file @
65b327a6
#!/usr/bin/env perl
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
# Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
misc-scripts/assembly/align_by_clone_identity.pl
View file @
65b327a6
#!/usr/bin/env perl
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
# Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
misc-scripts/assembly/align_nonident_regions.pl
View file @
65b327a6
#!/usr/bin/env perl
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
# Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
misc-scripts/assembly/align_nonident_regions_wrapper.pl
View file @
65b327a6
#!/usr/bin/env perl
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
# Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
misc-scripts/assembly/check_mapping.pl
View file @
65b327a6
#!/usr/bin/env perl
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
# Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
misc-scripts/assembly/cleanup_tmp_tables.sql
View file @
65b327a6
-- Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
-- Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
--
-- Licensed under the Apache License, Version 2.0 (the "License");
-- you may not use this file except in compliance with the License.
...
...
misc-scripts/assembly/compare_assemblies.pl
View file @
65b327a6
#!/usr/bin/env perl
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
# Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
misc-scripts/assembly/conservation_statistics.pl
View file @
65b327a6
#!/usr/bin/env perl
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
# Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
misc-scripts/assembly/ensembl_assembly_to_chain.pl
View file @
65b327a6
#!/usr/bin/env perl
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
# Copyright [1999-2014] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
misc-scripts/assembly/exon_conservation_check.pl
View file @
65b327a6
#!/usr/bin/env perl
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
# Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
misc-scripts/assembly/find_overlaps.pl
View file @
65b327a6
#!/usr/bin/env perl
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
# Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
misc-scripts/assembly/fix_asm_overlaps.pl
View file @
65b327a6
#!/usr/bin/env perl
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
# Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
misc-scripts/assembly/fix_cmp_overlaps.pl
View file @
65b327a6
#!/usr/bin/env perl
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
# Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
misc-scripts/assembly/fix_overlaps.pl
View file @
65b327a6
#!/usr/bin/env perl
# Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
Copyright
[
2016
]
EMBL
-
European
Bioinformatics
Institute
# Copyright [1999-2016] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
...
...
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