zebrafish and chicken have no species specific .SPC uniprot file so use the all entries copy

misc-scripts/xref_mapping/sql/populate_metadata.sql

@@ -115,7 +115,13 @@ INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date
 
 ###Zebrafish
 ##      uniprot
-INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (1, 7955, 'ftp://ftp.ebi.ac.uk/pub/databases/SPproteomes/swissprot_files/proteomes/7955.SPC', '', now(), now(), "UniProtParser");
+#until zebra fish has it's own .SPC file parse all.
+#INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (1, 7955, 'ftp://ftp.ebi.ac.uk/pub/databases/SPproteomes/swissprot_files/proteomes/7955.SPC', '', now(), now(), "UniProtParser");
+
+INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (1, 7955, 'ftp://ftp.ebi.ac.uk/pub/databases/uniprot/knowledgebase/uniprot_sprot.dat.gz', '', now(), now(), "UniProtParser");
+
+INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (1, 7955, 'ftp://ftp.ebi.ac.uk/pub/databases/uniprot/knowledgebase/uniprot_trembl.dat.gz', '', now(), now(), "UniProtParser");
+
 
 ##       refseq
 INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (3, 7955,'ftp://ftp.ncbi.nih.gov/genomes/D_rerio/protein/protein.gbk.gz', '', now(), now(), "RefSeqGPFFParser");
@@ -132,7 +138,12 @@ INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date
 
 ###chicken
 ##      uniprot
-INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (1, 9031, 'ftp://ftp.ebi.ac.uk/pub/databases/SPproteomes/swissprot_files/proteomes/9031.SPC', '', now(), now(), "UniProtParser");
+# no chicken specific file!!!!
+#INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (1, 9031, 'ftp://ftp.ebi.ac.uk/pub/databases/SPproteomes/swissprot_files/proteomes/9031.SPC', '', now(), now(), "UniProtParser");
+
+INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (1, 9031, 'ftp://ftp.ebi.ac.uk/pub/databases/uniprot/knowledgebase/uniprot_sprot.dat.gz', '', now(), now(), "UniProtParser");
+
+INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (1, 9031, 'ftp://ftp.ebi.ac.uk/pub/databases/uniprot/knowledgebase/uniprot_trembl.dat.gz', '', now(), now(), "UniProtParser");
 
 ##       refseq
 INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (3, 9031,'ftp://ftp.ncbi.nih.gov/genomes/Gallus_gallus/protein/protein.gbk.gz', '', now(), now(), "RefSeqGPFFParser");