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Commit 6ca93ea9 authored by Ian Longden's avatar Ian Longden
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added new table for interpro -> pfam info. Also added url source line for interpro

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......@@ -74,7 +74,7 @@ INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date
INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (1090, 9606,'http://www.gene.ucl.ac.uk/public-files/nomen/ens4.txt http://www.gene.ucl.ac.uk/public-files/nomen/ens1.txt', '', now(), now(), "HUGOParser");
## Interpro
#INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (1300, 9606,' ftp://ftp.ebi.ac.uk/pub/databases/interpro/short_name.dat ftp://ftp.ebi.ac.uk/pub/databases/interpro/protein2interpro.dat.gz', '', now(), now(), "InterproParser");
INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (1300, 9606,'ftp://ftp.ebi.ac.uk/pub/databases/interpro/short_name.dat ftp://ftp.ebi.ac.uk/pub/databases/interpro/protein2interpro.dat.gz', '', now(), now(), "InterproParser");
INSERT INTO source_url (source_id, species_id, url, checksum, file_modified_date, upload_date, parser) VALUES (1500, 9606,'ftp://ftp.ncbi.nih.gov/repository/OMIM/morbidmap', '', now(), now(), "MIMParser");
......
......@@ -123,3 +123,14 @@ CREATE TABLE species (
);
################################################################################
CREATE TABLE interpro (
interpro varchar(255) not null,
pfam varchar(255) not null,
PRIMARY KEY (interpro)
);
################################################################################
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