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ensembl-gh-mirror
ensembl
Commits
71af77e5
Commit
71af77e5
authored
Sep 19, 2005
by
Ian Longden
Browse files
estgene replaced with est in load_registry_from_db
parent
075efe63
Changes
1
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6 additions
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6 deletions
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-6
modules/Bio/EnsEMBL/Registry.pm
modules/Bio/EnsEMBL/Registry.pm
+6
-6
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modules/Bio/EnsEMBL/Registry.pm
View file @
71af77e5
...
...
@@ -893,20 +893,20 @@ sub load_registry_from_db{
print
$coredb
.
"
loaded
\n
"
if
(
$verbose
);
}
my
@est
gene
_dbs
=
grep
{
/^[a-z]+_[a-z]+_est
gene
_\d+_/
}
@dbnames
;
my
@est_dbs
=
grep
{
/^[a-z]+_[a-z]+_est_\d+_/
}
@dbnames
;
for
my
$est
gene
_db
(
@est
gene
_dbs
)
{
my
(
$species
,
$num
)
=
(
$est
gene
_db
=~
/(^[a-z]+_[a-z]+)_est
gene
_(\d+)/
);
for
my
$est_db
(
@est_dbs
)
{
my
(
$species
,
$num
)
=
(
$est_db
=~
/(^[a-z]+_[a-z]+)_est_(\d+)/
);
my
$dba
=
Bio::EnsEMBL::DBSQL::
DBAdaptor
->
new
(
-
group
=>
"
est
gene
",
(
-
group
=>
"
est
",
-
species
=>
$species
,
-
host
=>
$host
,
-
user
=>
$user
,
-
pass
=>
$pass
,
-
port
=>
$port
,
-
dbname
=>
$est
gene
_db
-
dbname
=>
$est_db
);
print
$est
gene
_db
.
"
loaded
\n
"
if
(
$verbose
);
print
$est_db
.
"
loaded
\n
"
if
(
$verbose
);
}
...
...
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