Commit 77f20df7 authored by Monika Komorowska's avatar Monika Komorowska
Browse files

removed warning in store_alt_alleles when none of the alt_alleles in a set is...

removed warning in store_alt_alleles when none of the alt_alleles in a set is on reference sequence - this is a valid case and doesn't require a warning
parent 9e5ca802
......@@ -1078,9 +1078,7 @@ sub store_alt_alleles {
warning('More than one alternative allele on the reference sequence (gene ids: ' . join(',',@ref_genes) . '). Ignoring.');
return;
}
if (scalar(@ref_genes) == 0) {
warning('None of the alternative alleles is on the reference sequence (gene ids: ' . join(',',@non_ref_genes) . '). Storing alt_alleles anyway.');
}
#
#insert the first gene seperately in order to get a unique identifier for
#the set of alleles
......
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