Commit 7989c9b5 authored by Glenn Proctor's avatar Glenn Proctor
Browse files

Typos.

parent 1f2c9b6b
......@@ -824,8 +824,9 @@ sub add_adaptor {
sub get_adaptor{
my ($class,$species,$group,$type)= @_;
$species = $class->get_alias($species);
my %dnadb_adaptors = qw(sequence 1 assemblymapper 1 karyotypeband 1 repeatfeature 1 coordsystem 1 assemblyexceptionfeature 1 );
my $dnadb_group = $registry_register{$species}{lc($group)}{_DNA};
......@@ -1078,8 +1079,8 @@ my $self = shift;
=head2 load_registry_from_url
Arg [1] : string $url
Example : load_registry_from_url("mysql://anonymous@ensembldb.ensembl.org:3306");
Arg [1] : string $url
Example : load_registry_from_url(mysql://anonymous@ensembldb.ensembl.org:3306);
Description: Will load the correct versions of the ensembl databases for the
software release it can find on a database instance into the
registry. Also adds a set of standard aliases. The url format is:
......@@ -1758,7 +1759,7 @@ sub load_registry_from_db {
);
Bio::EnsEMBL::Utils::ConfigRegistry->add_alias(
-species => "Procavia capensis",
-species => "Procavia_capensis",
-alias => [ 'rock_hyrax', 'hyrax', 'Procaviacapensis' ]
);
......@@ -1773,7 +1774,7 @@ sub load_registry_from_db {
);
Bio::EnsEMBL::Utils::ConfigRegistry->add_alias(
-species => "Tarsius syrichta",
-species => "Tarsius_syrichta",
-alias => [ 'philippine tarsier', 'tarsier', 'Tarsiussyrichta' ]
);
......
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