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ensembl
Commits
79d0379c
Commit
79d0379c
authored
Aug 08, 2013
by
Magali Ruffier
Browse files
cosmetic change: attempt to list UniGene sources in species alphabetical order
parent
d70bf113
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misc-scripts/xref_mapping/xref_config.ini
misc-scripts/xref_mapping/xref_config.ini
+93
-93
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misc-scripts/xref_mapping/xref_config.ini
View file @
79d0379c
...
...
@@ -2318,30 +2318,6 @@ parser = UCSCParser
release_uri
=
ftp://hgdownload.cse.ucsc.edu/goldenPath/mm10/database/README.txt
data_uri
=
ftp://hgdownload.cse.ucsc.edu/goldenPath/mm10/database/knownGene.txt.gz
[source UniGene::oryzias_latipes]
# Used by oryzias_latipes
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/*.LOG
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Oryzias_latipes/Ola.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Oryzias_latipes/Ola.data.gz
[source UniGene::gasterosteus_aculeatus]
# Used by oryzias_latipes
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/*.LOG
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Gasterosteus_aculeatus/Gac.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Gasterosteus_aculeatus/Gac.data.gz
[source UniGene::aedes_aegypti]
# Used by aedes_aegypti
name
=
UniGene
...
...
@@ -2402,30 +2378,6 @@ release_uri =
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Bos_taurus/Bt.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Bos_taurus/Bt.data.gz
[source UniGene::oryctolagus_cuniculus]
# Used by oryctolagus_cuniculus
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Oryctolagus_cuniculus/Ocu.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Oryctolagus_cuniculus/Ocu.data.gz
[source UniGene::sus_scrofa]
# Used by sus_scrofa
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Sus_scrofa/Ssc.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Sus_scrofa/Ssc.data.gz
[source UniGene::bombyx_mori]
# Used by bombyx_mori
name
=
UniGene
...
...
@@ -2438,42 +2390,6 @@ release_uri =
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Bombyx_mori/Bmo.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Bombyx_mori/Bmo.data.gz
[source UniGene::nematostella_vectensis]
# Used by nematostella_vectensis
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Nematostella_vectensis/Nve.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Nematostella_vectensis/Nve.data.gz
[source UniGene::tribolium_castaneum]
# Used by tribolium_castaneum
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Tribolium_castaneum/Tca.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Tribolium_castaneum/Tca.data.gz
[source UniGene::strongylocentrotus_purpuratus]
# Used by tribolium_castaneum
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Strongylocentrotus_purpuratus/Spu.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Strongylocentrotus_purpuratus/Spu.data.gz
[source UniGene::caenorhabditis_elegans]
# Used by caenorhabditis_elegans
name
=
UniGene
...
...
@@ -2570,6 +2486,18 @@ release_uri = ftp://ftp.ncbi.nih.gov/repository/UniGene/*.LOG
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Gallus_gallus/Gga.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Gallus_gallus/Gga.data.gz
[source UniGene::gasterosteus_aculeatus]
# Used by gasterosteus_aculeatus
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/*.LOG
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Gasterosteus_aculeatus/Gac.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Gasterosteus_aculeatus/Gac.data.gz
[source UniGene::homo_sapiens]
# Used by homo_sapiens
name
=
UniGene
...
...
@@ -2619,8 +2547,8 @@ release_uri = ftp://ftp.ncbi.nih.gov/repository/UniGene/*.LOG
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Monodelphis_domestica/Mdm.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Monodelphis_domestica/Mdm.data.gz
[source UniGene::
ixodes_scapulari
s]
# Used by
ixodes_scapulari
s
[source UniGene::
mus_musculu
s]
# Used by
mus_musculu
s
name
=
UniGene
download
=
Y
order
=
30
...
...
@@ -2628,20 +2556,20 @@ priority = 1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/*.LOG
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/
Ixodes_scapularis/Isc
.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/
Ixodes_scapularis/Isc
.data.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/
Mus_musculus/Mm
.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/
Mus_musculus/Mm
.data.gz
[source UniGene::
mus_musculu
s]
# Used by
mus_musculu
s
[source UniGene::
nematostella_vectensi
s]
# Used by
nematostella_vectensi
s
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/*.LOG
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/
Mus_musculus/Mm
.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/
Mus_musculus/Mm
.data.gz
release_uri
=
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/
Nematostella_vectensis/Nve
.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/
Nematostella_vectensis/Nve
.data.gz
[source UniGene::oreochromis_niloticus]
# Used by oreochromis_niloticus
...
...
@@ -2655,6 +2583,30 @@ release_uri = ftp://ftp.ncbi.nih.gov/repository/UniGene/*.LOG
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Oreochromis_niloticus/Oni.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Oreochromis_niloticus/Oni.data.gz
[source UniGene::oryctolagus_cuniculus]
# Used by oryctolagus_cuniculus
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Oryctolagus_cuniculus/Ocu.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Oryctolagus_cuniculus/Ocu.data.gz
[source UniGene::oryzias_latipes]
# Used by oryzias_latipes
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/*.LOG
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Oryzias_latipes/Ola.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Oryzias_latipes/Ola.data.gz
[source UniGene::ornithorhynchus_anatinus]
# Used by ornithorhynchus_anatinus
name
=
UniGene
...
...
@@ -2704,6 +2656,18 @@ release_uri = ftp://ftp.ncbi.nih.gov/repository/UniGene/*.LOG
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Rattus_norvegicus/Rn.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Rattus_norvegicus/Rn.data.gz
[source UniGene::sus_scrofa]
# Used by sus_scrofa
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Sus_scrofa/Ssc.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Sus_scrofa/Ssc.data.gz
[source UniGene::taeniopygia_guttata]
# Used by taeniopygia_guttata
name
=
UniGene
...
...
@@ -2728,6 +2692,30 @@ release_uri = ftp://ftp.ncbi.nih.gov/repository/UniGene/*.LOG
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Takifugu_rubripes/Tru.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Takifugu_rubripes/Tru.data.gz
[source UniGene::tribolium_castaneum]
# Used by tribolium_castaneum
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Tribolium_castaneum/Tca.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Tribolium_castaneum/Tca.data.gz
[source UniGene::strongylocentrotus_purpuratus]
# Used by tribolium_castaneum
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Strongylocentrotus_purpuratus/Spu.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Strongylocentrotus_purpuratus/Spu.data.gz
[source UniGene::xenopus_tropicalis]
# Used by xenopus_tropicalis
name
=
UniGene
...
...
@@ -2806,6 +2794,18 @@ release_uri =
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Hordeum_vulgare/Hv.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Hordeum_vulgare/Hv.data.gz
[source UniGene::ixodes_scapularis]
# Used by ixodes_scapularis
name
=
UniGene
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
UniGeneParser
release_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/*.LOG
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Ixodes_scapularis/Isc.seq.uniq.gz
data_uri
=
ftp://ftp.ncbi.nih.gov/repository/UniGene/Ixodes_scapularis/Isc.data.gz
[source UniGene::physcomitrella_patens]
name
=
UniGene
download
=
Y
...
...
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