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Commit 7a5c1326 authored by Monika Komorowska's avatar Monika Komorowska
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replaced method ExonerateGappedBest5_agam with ExonerateGappedBest5_55_perc_id

parent c9916248
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package XrefMapper::Methods::ExonerateGappedBest5_55_perc_id;
use XrefMapper::Methods::ExonerateBasic;
use vars '@ISA';
@ISA = qw{XrefMapper::Methods::ExonerateBasic};
sub options {
return ('--gappedextension FALSE', '--model', 'affine:local', '--subopt', 'no', '--bestn', '5');
}
sub query_identity_threshold {
return 55;
}
sub target_identity_threshold {
return 55;
}
1;
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