Commit 7c94d80b authored by Daniel Barrell's avatar Daniel Barrell
Browse files

Now handles all component_type contigs which are not gaps

parent 29f8c453
......@@ -337,7 +337,7 @@ MAP: while(<MAPPER>){
else{
print "About to process an agp line for ".$acc_to_name{$acc}."\n";
}
if($type eq "F" or $type eq "O" or $type eq "A"){
if($type =~ /[ADFGOPW]/){
if($strand eq "+"){
$strand = 1;
}
......
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