Commit 80f69c74 authored by Magali Ruffier's avatar Magali Ruffier
Browse files

removed pepstats for otherfeatures databases

parent d02e36cf
package Bio::EnsEMBL::Pipeline::Production::EmailSummaryCore;
package Bio::EnsEMBL::Pipeline::Production::EmailSummaryOtherf;
use strict;
use warnings;
......@@ -10,21 +10,17 @@ sub fetch_input {
$self->assert_executable('sendmail');
my $pep_stats_v = $self->jobs('PepStatsVega');
my $pep_stats_o = $self->jobs('PepStatsOtherf');
my $pep_stats = $self->jobs('PepStatsVega');
my $ct_exons = $self->jobs('ConstitutiveExons');
my @args = (
$pep_stats_v->{successful_jobs},
$pep_stats_v->{failed_jobs},
$pep_stats_o->{successful_jobs},
$pep_stats_o->{failed_jobs},
$pep_stats->{successful_jobs},
$pep_stats->{failed_jobs},
$ct_exons->{successful_jobs},
$ct_exons->{failed_jobs},
$self->failed(),
$self->summary($pep_stats_v),
$self->summary($pep_stats_o),
$self->summary($pep_stats),
$self->summary($ct_exons),
);
......@@ -32,7 +28,6 @@ sub fetch_input {
Your FASTA Pipeline has finished. We have:
* %d vega databases with pep stats (%d failed)
* %d otherfeatures databases with pep stats (%d failed)
* %d vega databases with constitutive exons (%d failed)
%s
......@@ -45,8 +40,6 @@ Full breakdown follows ...
%s
%s
MSG
$self->param('text', $msg);
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment