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Commit 931f34a4 authored by Monika Komorowska's avatar Monika Komorowska
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RFAM xrefs need to be parsed using CoreXrefParser for EnsemblGenomes

parent f0f5d623
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package XrefParser::RFAMParser_EG;
#RFAM Parser which loads the registry from the staging servers for EnsemblGenomes databases.
use strict;
use warnings;
use Carp;
use DBI;
use base qw( XrefParser::BaseParser);
use base qw( XrefParser::RFAMParser);
use Bio::EnsEMBL::Registry;
sub load_registry {
my ($self, $registry) = @_;
$registry->load_registry_from_multiple_dbs(
{
'-host' => 'mysql-eg-staging-1.ebi.ac.uk',
'-port' => 4160,
'-user' => 'ensro',
},
{
'-host' => 'mysql-eg-staging-2.ebi.ac.uk',
'-port' => 4275,
'-user' => 'ensro',
},
);
return $registry;
}
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