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Commit 932cd31b authored by Andy Yates's avatar Andy Yates
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Rolling back the code to 1.20 because of issues with re-binning the human Y...

Rolling back the code to 1.20 because of issues with re-binning the human Y chromsome density values resulting in a -ve value.
parent 73fcb889
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......@@ -49,7 +49,11 @@ $sth->execute();
my @sorted_slices = sort( {
$a->coord_system()->rank() <=> $b->coord_system()->rank()
|| $b->seq_region_length() <=> $a->seq_region_length()
} @{ $slice_adaptor->fetch_all('toplevel', '', undef, 1) } );
} @{ $slice_adaptor->fetch_all('toplevel')} );
# Cannot use this due to PAR regions & basefeatureadaptor's fetch method
#understanding par region translation
#} @{ $slice_adaptor->fetch_all('toplevel', '', undef, 1) } );
my $analysis = $analysis_adaptor->fetch_by_logic_name('snpdensity');
# new Bio::EnsEMBL::Analysis(
......
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