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ensembl-gh-mirror
ensembl
Commits
9963df9b
Commit
9963df9b
authored
Sep 10, 2010
by
Andreas Kusalananda Kähäri
Browse files
Switch from using 'base' to instead use (the more light-weight) 'parent'
for specifying inheritance.
parent
c5db1724
Changes
10
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10 changed files
with
10 additions
and
10 deletions
+10
-10
modules/Bio/EnsEMBL/ApiVersion.pm
modules/Bio/EnsEMBL/ApiVersion.pm
+1
-1
modules/Bio/EnsEMBL/DBSQL/GOTermAdaptor.pm
modules/Bio/EnsEMBL/DBSQL/GOTermAdaptor.pm
+1
-1
modules/Bio/EnsEMBL/DBSQL/OntologyDBAdaptor.pm
modules/Bio/EnsEMBL/DBSQL/OntologyDBAdaptor.pm
+1
-1
modules/Bio/EnsEMBL/DBSQL/OntologyTermAdaptor.pm
modules/Bio/EnsEMBL/DBSQL/OntologyTermAdaptor.pm
+1
-1
modules/Bio/EnsEMBL/DBSQL/SOTermAdaptor.pm
modules/Bio/EnsEMBL/DBSQL/SOTermAdaptor.pm
+1
-1
modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/AedesAegypti.pm
...s/Bio/EnsEMBL/IdMapping/StableIdGenerator/AedesAegypti.pm
+1
-1
modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/AnophelesGambiae.pm
...o/EnsEMBL/IdMapping/StableIdGenerator/AnophelesGambiae.pm
+1
-1
modules/Bio/EnsEMBL/OntologyTerm.pm
modules/Bio/EnsEMBL/OntologyTerm.pm
+1
-1
modules/Bio/EnsEMBL/Utils/Eprof.pm
modules/Bio/EnsEMBL/Utils/Eprof.pm
+1
-1
modules/Bio/EnsEMBL/Utils/Scalar.pm
modules/Bio/EnsEMBL/Utils/Scalar.pm
+1
-1
No files found.
modules/Bio/EnsEMBL/ApiVersion.pm
View file @
9963df9b
...
...
@@ -42,7 +42,7 @@ use warnings;
use
Exporter
;
use
base
qw( Exporter )
;
use
parent
qw( Exporter )
;
our
@EXPORT
=
qw( software_version )
;
...
...
modules/Bio/EnsEMBL/DBSQL/GOTermAdaptor.pm
View file @
9963df9b
...
...
@@ -37,7 +37,7 @@ package Bio::EnsEMBL::DBSQL::GOTermAdaptor;
use
strict
;
use
warnings
;
use
base
qw( Bio::EnsEMBL::DBSQL::OntologyTermAdaptor )
;
use
parent
qw( Bio::EnsEMBL::DBSQL::OntologyTermAdaptor )
;
=head2 new
...
...
modules/Bio/EnsEMBL/DBSQL/OntologyDBAdaptor.pm
View file @
9963df9b
...
...
@@ -36,7 +36,7 @@ package Bio::EnsEMBL::DBSQL::OntologyDBAdaptor;
use
strict
;
use
warnings
;
use
base
qw (
Bio::EnsEMBL::DBSQL::
DBAdaptor
);
use
parent
qw (
Bio::EnsEMBL::DBSQL::
DBAdaptor
);
sub
get_available_adaptors
{
return
{
...
...
modules/Bio/EnsEMBL/DBSQL/OntologyTermAdaptor.pm
View file @
9963df9b
...
...
@@ -59,7 +59,7 @@ use Bio::EnsEMBL::Utils::Exception qw( throw );
use
Bio::EnsEMBL::
OntologyTerm
;
use
base
qw( Bio::EnsEMBL::DBSQL::BaseAdaptor )
;
use
parent
qw( Bio::EnsEMBL::DBSQL::BaseAdaptor )
;
=head2 new
...
...
modules/Bio/EnsEMBL/DBSQL/SOTermAdaptor.pm
View file @
9963df9b
...
...
@@ -38,7 +38,7 @@ package Bio::EnsEMBL::DBSQL::SOTermAdaptor;
use
strict
;
use
warnings
;
use
base
qw( Bio::EnsEMBL::DBSQL::OntologyTermAdaptor )
;
use
parent
qw( Bio::EnsEMBL::DBSQL::OntologyTermAdaptor )
;
=head2 new
...
...
modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/AedesAegypti.pm
View file @
9963df9b
...
...
@@ -26,7 +26,7 @@ package Bio::EnsEMBL::IdMapping::StableIdGenerator::AedesAegypti;
use
strict
;
use
warnings
;
use
base
qw(Bio::EnsEMBL::IdMapping::StableIdGenerator::EnsemblGeneric)
;
use
parent
qw(Bio::EnsEMBL::IdMapping::StableIdGenerator::EnsemblGeneric)
;
sub
increment_stable_id
{
...
...
modules/Bio/EnsEMBL/IdMapping/StableIdGenerator/AnophelesGambiae.pm
View file @
9963df9b
...
...
@@ -30,7 +30,7 @@ package Bio::EnsEMBL::IdMapping::StableIdGenerator::AedesAegypti;
use
strict
;
use
warnings
;
use
base
qw(Bio::EnsEMBL::IdMapping::StableIdGenerator::EnsemblGeneric)
;
use
parent
qw(Bio::EnsEMBL::IdMapping::StableIdGenerator::EnsemblGeneric)
;
sub
increment_stable_id
{
...
...
modules/Bio/EnsEMBL/OntologyTerm.pm
View file @
9963df9b
...
...
@@ -40,7 +40,7 @@ use warnings;
use
Bio::EnsEMBL::Utils::
Argument
qw( rearrange )
;
use
base
qw( Bio::EnsEMBL::Storable )
;
use
parent
qw( Bio::EnsEMBL::Storable )
;
=head2 new
...
...
modules/Bio/EnsEMBL/Utils/Eprof.pm
View file @
9963df9b
...
...
@@ -52,7 +52,7 @@ use warnings;
use
Bio::EnsEMBL::Utils::
Exception
('
throw
');
use
Bio::EnsEMBL::Utils::
EprofStack
;
use
base
('
Exporter
'
);
use
parent
qw(
Exporter
)
;
our
@EXPORT_OK
=
(
'
eprof_start
',
'
eprof_end
',
'
eprof_dump
',
'
eprof_reset
'
);
...
...
modules/Bio/EnsEMBL/Utils/Scalar.pm
View file @
9963df9b
...
...
@@ -61,7 +61,7 @@ $Revision$
use
strict
;
use
warnings
;
use
base
qw(Exporter)
;
use
parent
qw(Exporter)
;
our
@EXPORT_OK
=
qw(check_ref assert_ref)
;
use
Bio::EnsEMBL::Utils::
Exception
qw(throw)
;
...
...
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