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ensembl-gh-mirror
ensembl
Commits
a65e2c66
Commit
a65e2c66
authored
15 years ago
by
Ian Longden
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add strain info to the cache key if the slice is a StrainSlice to stop chaching problems
parent
a991458b
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1 changed file
modules/Bio/EnsEMBL/DBSQL/BaseFeatureAdaptor.pm
+14
-0
14 additions, 0 deletions
modules/Bio/EnsEMBL/DBSQL/BaseFeatureAdaptor.pm
with
14 additions
and
0 deletions
modules/Bio/EnsEMBL/DBSQL/BaseFeatureAdaptor.pm
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View file @
a65e2c66
...
...
@@ -225,6 +225,9 @@ sub fetch_all_by_Slice_constraint {
$constraint
||=
'';
$constraint
=
$self
->
_logic_name_to_constraint
(
$constraint
,
$logic_name
);
# If the logic name was invalid, undef was returned
return
[]
if
(
!
defined
(
$constraint
)
);
...
...
@@ -235,6 +238,17 @@ sub fetch_all_by_Slice_constraint {
!
(
defined
(
$self
->
db
()
->
no_cache
()
)
&&
$self
->
db
()
->
no_cache
()
)
)
{
#strain test and add to constraint if so to stop caching.
if
(
$slice
->
isa
('
Bio::EnsEMBL::StrainSlice
')){
my
$string
=
$self
->
dbc
->
db_handle
->
quote
(
$slice
->
strain_name
);
if
(
$constraint
ne
""){
$constraint
.=
"
AND
$string
=
$string
";
}
else
{
$constraint
.=
"
$string
=
$string
";
}
}
# Check the cache and return the cached results if we have already
# done this query. The cache key is the made up from the slice
# name, the constraint, and the bound parameters (if there are any).
...
...
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