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ensembl-gh-mirror
ensembl
Commits
a98127de
Commit
a98127de
authored
12 years ago
by
Magali Ruffier
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removed source IPI
parent
1202b444
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1 changed file
misc-scripts/xref_mapping/xref_config.ini
+0
-82
0 additions, 82 deletions
misc-scripts/xref_mapping/xref_config.ini
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82 deletions
misc-scripts/xref_mapping/xref_config.ini
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View file @
a98127de
...
...
@@ -1375,82 +1375,6 @@ parser = SegmentParser
release_uri
=
data_uri
=
file:Mus_musculus/Segments/Seg_xrefs.txt
[source IPI::arabidopsis_thaliana]
name
=
IPI
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
IPIParser
release_uri
=
data_uri
=
ftp://ftp.ebi.ac.uk/pub/databases/IPI/current/ipi.ARATH.fasta.gz
[source IPI::bos_taurus]
# Used by bos_taurus
name
=
IPI
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
IPIParser
release_uri
=
data_uri
=
ftp://ftp.ebi.ac.uk/pub/databases/IPI/current/ipi.BOVIN.fasta.gz
[source IPI::gallus_gallus]
# Used by gallus_gallus
name
=
IPI
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
IPIParser
release_uri
=
data_uri
=
ftp://ftp.ebi.ac.uk/pub/databases/IPI/current/ipi.CHICK.fasta.gz
[source IPI::danio_rerio]
# Used by danio_rerio
name
=
IPI
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
IPIParser
release_uri
=
data_uri
=
ftp://ftp.ebi.ac.uk/pub/databases/IPI/current/ipi.DANRE.fasta.gz
[source IPI::homo_sapiens]
# Used by homo_sapiens
name
=
IPI
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
IPIParser
release_uri
=
data_uri
=
ftp://ftp.ebi.ac.uk/pub/databases/IPI/current/ipi.HUMAN.fasta.gz
[source IPI::mus_musculus]
# Used by mus_musculus
name
=
IPI
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
IPIParser
release_uri
=
data_uri
=
ftp://ftp.ebi.ac.uk/pub/databases/IPI/current/ipi.MOUSE.fasta.gz
[source IPI::rattus_norvegicus]
# Used by rattus_norvegicus
name
=
IPI
download
=
Y
order
=
30
priority
=
1
prio_descr
=
parser
=
IPIParser
release_uri
=
data_uri
=
ftp://ftp.ebi.ac.uk/pub/databases/IPI/current/ipi.RAT.fasta.gz
[source Interpro::MULTI]
# Used by aedes_aegypti, anolis_carolinensis, anopheles_gambiae, apis_mellifera, bos_taurus, caenorhabditis_elegans, canis_familiaris, cavia_porcellus, ciona_intestinalis, ciona_savignyi, danio_rerio, dasypus_novemcinctus, echinops_telfairi, erinaceus_europaeus, equus_caballus, felis_catus, gallus_gallus, gasterosteus_aculeatus, homo_sapiens, ixodes__scapularis, loxodonta_africana, macaca_mulatta, microcebus_murinus, monodelphis_domestica, mus_musculus, myotis_lucifugus, ochotona_princeps, ornithorhynchus_anatinus, oryctolagus_cuniculus, ottolemur_garnetti, pan_troglodytes,pongo_abelii, oryzias_latipes, rattus_norvegicus, saccharomyces_cerevisiae, sorex_araneus, ictidomys_tridecemlineatus,sus_scrofa, taeniopygia_guttata, takifugu_rubripes, tupaia_belangeri, xenopus_tropicalis,thalassiosira_pseudonana, phaeodactylum_tricornutum
name
=
Interpro
...
...
@@ -4625,7 +4549,6 @@ source = GO::MULTI
source
=
goslim_goa::MULTI
source
=
InterproGO::MULTI
source
=
Interpro::MULTI
source
=
IPI::bos_taurus
source
=
RefSeq_dna::bos_taurus
source
=
RefSeq_peptide::bos_taurus
source
=
UniGene::bos_taurus
...
...
@@ -4761,7 +4684,6 @@ source = EntrezGene::MULTI
source
=
GO::danio_rerio
source
=
goslim_goa::MULTI
source
=
InterproGO::MULTI
source
=
IPI::danio_rerio
source
=
Interpro::MULTI
source
=
RefSeq_dna::danio_rerio
source
=
RefSeq_peptide::danio_rerio
...
...
@@ -5127,7 +5049,6 @@ source = GO::MULTI
source
=
goslim_goa::MULTI
source
=
InterproGO::MULTI
source
=
Interpro::MULTI
source
=
IPI::gallus_gallus
source
=
RefSeq_dna::gallus_gallus
source
=
RefSeq_peptide::gallus_gallus
source
=
UniGene::gallus_gallus
...
...
@@ -5188,7 +5109,6 @@ source = InterproGO::MULTI
source
=
HGNC::homo_sapiens
source
=
HGNC::homo_sapiens#01
source
=
HGNC::homo_sapiens#02
source
=
IPI::homo_sapiens
source
=
Interpro::MULTI
source
=
MIM::homo_sapiens
source
=
MIM2GENE::homo_sapiens
...
...
@@ -5371,7 +5291,6 @@ source = goslim_goa::MULTI
source
=
InterproGO::MULTI
source
=
IMGT/GENE_DB::mus_musculus
source
=
IKMCs_KOs::mus_musculus
source
=
IPI::mus_musculus
source
=
MGI::mus_musculus#01
source
=
MGI::mus_musculus#02
source
=
MGI::mus_musculus#03
...
...
@@ -5643,7 +5562,6 @@ source = EntrezGene::MULTI
source
=
GO::rattus_norvegicus
source
=
goslim_goa::MULTI
source
=
InterproGO::MULTI
source
=
IPI::rattus_norvegicus
source
=
Interpro::MULTI
source
=
RGD::rattus_norvegicus
source
=
RefSeq_dna::rattus_norvegicus
...
...
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