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Commit b02b21fe authored by Magali Ruffier's avatar Magali Ruffier
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ENSCORESW-2331: skip any non-standard accessions

parent 19978c64
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......@@ -342,10 +342,13 @@ sub run_script {
if ($best_id) {
my ($acc, $version) = split(/\./, $id);
$version =~ s/\D//g if $version;
my $source_id = $mrna_source_id;
my $source_id;
$source_id = $mrna_source_id if $acc =~ /^NM_/;
$source_id = $ncrna_source_id if $acc =~ /^NR_/;
$source_id = $pred_mrna_source_id if $acc =~ /^XM_/;
$source_id = $pred_ncrna_source_id if $acc =~ /^XR_/;
# Accession should be of format NM_/XM_/NR_/XR_ otherwise it is not valid
if (!defined $source_id) { next; }
my $xref_id = $self->add_xref({ acc => $acc,
version => $version,
label => $id,
......
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