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ensembl-gh-mirror
ensembl
Commits
c1f3e03d
Commit
c1f3e03d
authored
14 years ago
by
Andreas Kusalananda Kähäri
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Rephrase mentionings of ensembl-dev.
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51921958
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modules/Bio/EnsEMBL/Registry.pm
+16
-16
16 additions, 16 deletions
modules/Bio/EnsEMBL/Registry.pm
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16 deletions
modules/Bio/EnsEMBL/Registry.pm
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16
−
16
View file @
c1f3e03d
...
@@ -184,7 +184,7 @@ my %group2adaptor = (
...
@@ -184,7 +184,7 @@ my %group2adaptor = (
users, specially if you need to store and retrieve
users, specially if you need to store and retrieve
features. It might reduce performance when querying
features. It might reduce performance when querying
the database if not used properly. If in doubt, do
the database if not used properly. If in doubt, do
not use it or ask in
ensembl-dev
.
not use it or ask in
the developer mailing list
.
Example : Bio::EnsEMBL::Registry->load_all();
Example : Bio::EnsEMBL::Registry->load_all();
Returntype : none
Returntype : none
...
@@ -1248,13 +1248,13 @@ my $self = shift;
...
@@ -1248,13 +1248,13 @@ my $self = shift;
Arg [2] : (optional) integer
Arg [2] : (optional) integer
If not 0, will print out all information.
If not 0, will print out all information.
Arg [3] : (optional) integer
Arg [3] : (optional) integer
This option will turn off caching for slice features,
This option will turn off caching for slice features,
so,
so,
every time a set of features is retrieved, they
every time a set of features is retrieved, they
will come
will come
from the database instead of the cache. This
from the database instead of the cache. This
option is only
option is only
recommended for advanced users, specially
recommended for advanced users, specially
if you need to
if you need to
store and retrieve features. It might
store and retrieve features. It might
reduce performance when
reduce performance when
querying the database if not used
querying the database if not used
properly. If in doubt, do
properly. If in doubt, do not use it or ask in ensembl-dev
not use it or ask in the developer mailing list.
Example : load_registry_from_url(
Example : load_registry_from_url(
'mysql://anonymous@ensembldb.ensembl.org:3306');
'mysql://anonymous@ensembldb.ensembl.org:3306');
...
@@ -1356,14 +1356,14 @@ sub load_registry_from_url {
...
@@ -1356,14 +1356,14 @@ sub load_registry_from_url {
problems and know what you are doing.
problems and know what you are doing.
Arg [-NO_CACHE]: (optional) boolean
Arg [-NO_CACHE]: (optional) boolean
This option will turn off caching for slice
This option will turn off caching for slice
features,
features,
so, every time a set of features is
so, every time a set of features is
retrieved, they
retrieved, they
will come from the database instead
will come from the database instead
of the cache. This
of the cache. This
option is only recommended for
option is only recommended for
advanced users, specially
advanced users, specially if you need to store and
if you need to store and retrieve features. It might
re
trieve features. It might reduce performance when
re
duce performance when querying the database if not
querying the database if not used properly. If in
used properly. If in doubt, do not use it or ask in the
d
oubt, do not use it or ask in ensembl-dev
.
d
eveloper mailing list
.
Arg [SPECIES_SUFFIX]: (optional) string
Arg [SPECIES_SUFFIX]: (optional) string
This option will append the string to the species name
This option will append the string to the species name
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