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Commit c42d12a4 authored by Andreas Kusalananda Kähäri's avatar Andreas Kusalananda Kähäri
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Add the unmapped_reason table again.

Modify formatting of generated SQL.
parent 810e346c
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......@@ -157,7 +157,8 @@ if ( !GetOptions( 'release|r=i' => \$release,
exit();
}
my @tables = ( 'attrib_type', 'external_db', 'misc_set' );
my @tables =
( 'attrib_type', 'external_db', 'misc_set', 'unmapped_reason' );
my @dbtypes = ( 'core', 'otherfeatures', 'cdna', 'vega' );
my @db_handles;
......@@ -218,11 +219,11 @@ foreach my $dbh (@db_handles) {
sprintf( "-- insert %s_id=%d in %s\n",
$table, $pk, $table ),
sprintf(
"INSERT INTO %s (%s) VALUES (%s);\n",
"INSERT INTO %s (\n\t%s\n) VALUES (\n\t%s\n);\n",
$dbh->quote_identifier( undef, $dbname, $table ),
join( ',', map { $dbh->quote_identifier($_) } @fields ),
join( ",\n\t", map { $dbh->quote_identifier($_) } @fields ),
join(
',',
",\n\t",
map {
$dbh->quote( $row->{$_},
$colinfo->{$_}{'DATA_TYPE'} )
......@@ -257,15 +258,15 @@ foreach my $dbh (@db_handles) {
sprintf( "-- MASTER: insert from %s.%s\n",
$dbname, $table ),
sprintf(
"INSERT INTO %s (%s) VALUES (%s);\n",
"INSERT INTO %s (\n\t%s\n) VALUES (\n\t%s\n);\n",
$dbh->quote_identifier(
undef,
sprintf( 'ensembl_production_%d', $release ),
sprintf( 'master_%s', $table ) ),
join( ',',
join( ",\n\t",
map { $dbh->quote_identifier($_) } @fields ),
join(
',',
",\n\t",
map {
$dbh->quote( $row->{$_},
$colinfo->{$_}{'DATA_TYPE'} )
......@@ -308,7 +309,7 @@ foreach my $dbh (@db_handles) {
sprintf( "-- update %s in %s\n",
join( ', ', keys(%diff_fields) ), $table ),
sprintf(
"UPDATE %s SET %s WHERE %s_id = %d;\n",
"UPDATE %s\nSET %s\nWHERE %s_id = %d;\n",
$dbh->quote_identifier( undef, $dbname, $table ),
join(
', ',
......
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