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Commit c68b0137 authored by Andy Yates's avatar Andy Yates
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adding counts

parent 3b3ad1ce
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......@@ -79,6 +79,9 @@ sub compare_exons {
my $new_slice_adaptor = $R_slice->adaptor();
my $old_exons = $A_slice->get_all_Exons;
$support->log(sprintf("Total exons %d\n", scalar(@{$old_exons})));
while (my $old_exon = shift @$old_exons) {
# Establish equivalent locations on old and new DBs
......@@ -154,6 +157,7 @@ sub compare_transcripts {
my $new_slice_adaptor = $R_slice->adaptor();
my $old_transcripts = $A_slice->get_all_Transcripts();
$support->log(sprintf("Total transcripts %d\n", scalar(@{$old_transcripts})));
while (my $old_transcript = shift @$old_transcripts) {
my $new_A_slice = new_Slice($old_transcript, $new_slice_adaptor);
my $shadow_transcript = clone_Transcript($old_transcript);
......
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