Skip to content
Snippets Groups Projects
Commit ca1c702c authored by Ian Longden's avatar Ian Longden
Browse files

added Fantom source for mouse

parent 80e9353a
No related branches found
No related tags found
No related merge requests found
......@@ -449,6 +449,16 @@ data_uri = comes via EntrezGene
#release_uri =
#data_uri = ftp://ftp.flybase.net/genomes/Drosophila_melanogaster/current/gff/dmel-all-*.gff.gz
[source Fantom::mus_musculus]
# Used by mus_muscullus
name = Fantom
download = Y
order = 100
priority = 1
prio_descr =
parser = FantomParser
release_uri =
data_uri = ftp://fantom.gsc.riken.jp/FANTOM3/DDBJ/DDBJ_fantom3_HTC_accession.txt.gz
[source flybase_annotation_id::drosophila_melanogaster]
# Used by drosophila_melanogaster
......@@ -2614,17 +2624,15 @@ source = MGI::mus_musculus#03
source = MGI::mus_musculus#04
source = MGI_curated_transcript::mus_musculus
source = Interpro::MULTI
#source = OTTT::mus_musculus # data obtained form merge
source = RefSeq_dna::mus_musculus
source = RefSeq_dna::mus_musculus#01
source = RefSeq_peptide::mus_musculus
source = UniGene::mus_musculus
source = Uniprot/SPTREMBL::MULTI
source = Uniprot/SWISSPROT::MULTI
#source = Uniprot/Varsplic::MULTI
#source = Vega_mouse_transcript::mus_musculus # removed use Vega_transcript
source = ncRNA::MULTI
source = UCSC::mus_musculus
source = Fantom::mus_musculus
[species myotis_lucifugus]
taxonomy_id = 59463
......
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment