Change types of analysis_id and external_db_id columns.

sql/patch_43_44_a.sql

+# patch_43_44_a
+#
+# title: Key column types
+#
+# description:
+# Change the types of some columns to make them more appropriate to the values they store.
+
+ALTER TABLE analysis CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL AUTO_INCREMENT;
+ALTER TABLE oligo_feature CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE analysis_description CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE simple_feature CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE protein_align_feature CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE dna_align_feature CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE repeat_feature CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE gene CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE transcript CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE protein_feature CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE identity_xref CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE prediction_transcript CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE marker_feature CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE qtl_feature CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE density_type CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE regulatory_feature CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE regulatory_search_region CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE unmapped_object CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE ditag_feature CHANGE COLUMN analysis_id analysis_id SMALLINT UNSIGNED NOT NULL;
+
+ALTER TABLE external_db CHANGE COLUMN external_db_id external_db_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE xref CHANGE COLUMN external_db_id external_db_id SMALLINT UNSIGNED NOT NULL;
+ALTER TABLE unmapped_object CHANGE COLUMN external_db_id external_db_id SMALLINT UNSIGNED NOT NULL;
+
+# patch identifier
+INSERT INTO meta (meta_key, meta_value) VALUES ('patch', 'patch_43_44_a.sql|rationalise_key_columns');
+