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ensembl-gh-mirror
ensembl
Commits
cbbd5bc1
Commit
cbbd5bc1
authored
10 years ago
by
Kieron Taylor
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[
ENSCORESW-924
] Remove a deprecated Compara method call.
parent
37010b9f
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!25
GFF3 export: unstranded features and using analysis.gff_source
,
!25
GFF3 export: unstranded features and using analysis.gff_source
,
!25
GFF3 export: unstranded features and using analysis.gff_source
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modules/Bio/EnsEMBL/Gene.pm
+1
-2
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modules/Bio/EnsEMBL/Gene.pm
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modules/Bio/EnsEMBL/Gene.pm
+
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View file @
cbbd5bc1
...
...
@@ -876,8 +876,7 @@ sub get_all_homologous_Genes {
# Get the compara 'member' corresponding to self
my
$member_adaptor
=
$compara_dba
->
get_adaptor
('
GeneMember
');
my
$query_member
=
$member_adaptor
->
fetch_by_source_stable_id
("
ENSEMBLGENE
",
$self
->
stable_id
);
my
$query_member
=
$member_adaptor
->
fetch_by_stable_id
(
$self
->
stable_id
);
unless
(
$query_member
){
return
$self
->
{'
homologues
'}
->
{
$compara_species
}
};
# Get the compara 'homologies' corresponding to 'member'
...
...
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