Commit cfe26ad2 authored by Magali Ruffier's avatar Magali Ruffier
Browse files

update master schema to release 79

parent 3ad784b1
......@@ -55,7 +55,7 @@ use base qw( Exporter );
our @EXPORT = qw( software_version );
my $API_VERSION = 78;
my $API_VERSION = 79;
sub software_version { return $API_VERSION }
......
--
-- Created by SQL::Translator::Producer::SQLite
-- Created on Tue Oct 28 16:45:25 2014
-- Created on Fri Dec 5 13:10:29 2014
--
BEGIN TRANSACTION;
......
......@@ -23,8 +23,9 @@
79 \N patch patch_77_78_a.sql|schema_version
80 \N patch patch_77_78_b.sql|source_column_increase
81 \N patch patch_77_78_c.sql|Change unmapped_reason_id from smallint to int
82 \N patch patch_78_79_a.sql|schema_version
1 \N schema_type core
2 \N schema_version 78
2 \N schema_version 79
8 1 assembly.accession GCA_000292705.1
10 1 assembly.date 2012-08
7 1 assembly.default GCA_000292705.1
......
......@@ -469,7 +469,7 @@ CREATE TABLE `meta` (
PRIMARY KEY (`meta_id`),
UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
KEY `species_value_idx` (`species_id`,`meta_value`)
) ENGINE=InnoDB AUTO_INCREMENT=82 DEFAULT CHARSET=latin1;
) ENGINE=InnoDB AUTO_INCREMENT=83 DEFAULT CHARSET=latin1;
CREATE TABLE `meta_coord` (
`table_name` varchar(40) NOT NULL,
......
--
-- Created by SQL::Translator::Producer::SQLite
-- Created on Tue Oct 28 16:45:34 2014
-- Created on Fri Dec 5 13:10:39 2014
--
BEGIN TRANSACTION;
......
1 \N schema_version 78
1 \N schema_version 79
2 1 assembly.default NCBI34
3 1 species.taxonomy_id 9606
26 1 species.classification Homo sapiens
......@@ -58,3 +58,4 @@
118 \N patch patch_77_78_a.sql|schema_version
119 \N patch patch_77_78_b.sql|source_column_increase
120 \N patch patch_77_78_c.sql|Change unmapped_reason_id from smallint to int
121 \N patch patch_78_79_a.sql|schema_version
......@@ -468,7 +468,7 @@ CREATE TABLE `meta` (
PRIMARY KEY (`meta_id`),
UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
KEY `species_value_idx` (`species_id`,`meta_value`)
) ENGINE=MyISAM AUTO_INCREMENT=121 DEFAULT CHARSET=latin1;
) ENGINE=MyISAM AUTO_INCREMENT=122 DEFAULT CHARSET=latin1;
CREATE TABLE `meta_coord` (
`table_name` varchar(40) NOT NULL,
......
--
-- Created by SQL::Translator::Producer::SQLite
-- Created on Tue Oct 28 16:45:41 2014
-- Created on Fri Dec 5 13:10:45 2014
--
BEGIN TRANSACTION;
......
1 \N schema_version 78
1 \N schema_version 79
2 1 assembly.default NCBI34
33 1 species.classification Chordata
32 1 species.classification Vertebrata
......@@ -58,3 +58,4 @@
107 \N patch patch_77_78_a.sql|schema_version
108 \N patch patch_77_78_b.sql|source_column_increase
109 \N patch patch_77_78_c.sql|Change unmapped_reason_id from smallint to int
110 \N patch patch_78_79_a.sql|schema_version
......@@ -463,7 +463,7 @@ CREATE TABLE `meta` (
PRIMARY KEY (`meta_id`),
UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
KEY `species_value_idx` (`species_id`,`meta_value`)
) ENGINE=MyISAM AUTO_INCREMENT=110 DEFAULT CHARSET=latin1;
) ENGINE=MyISAM AUTO_INCREMENT=111 DEFAULT CHARSET=latin1;
CREATE TABLE `meta_coord` (
`table_name` varchar(40) NOT NULL DEFAULT '',
......
--
-- Created by SQL::Translator::Producer::SQLite
-- Created on Tue Oct 28 16:45:49 2014
-- Created on Fri Dec 5 13:10:53 2014
--
BEGIN TRANSACTION;
......
1 \N schema_version 78
1 \N schema_version 79
2014 1 species.classification Haplorrhini
40 1 assembly.default GRCh37
41 1 assembly.date 2009-02
......@@ -62,3 +62,4 @@
2069 \N patch patch_77_78_a.sql|schema_version
2070 \N patch patch_77_78_b.sql|source_column_increase
2071 \N patch patch_77_78_c.sql|Change unmapped_reason_id from smallint to int
2072 \N patch patch_78_79_a.sql|schema_version
......@@ -462,7 +462,7 @@ CREATE TABLE `meta` (
PRIMARY KEY (`meta_id`),
UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
KEY `species_value_idx` (`species_id`,`meta_value`)
) ENGINE=MyISAM AUTO_INCREMENT=2072 DEFAULT CHARSET=latin1;
) ENGINE=MyISAM AUTO_INCREMENT=2073 DEFAULT CHARSET=latin1;
CREATE TABLE `meta_coord` (
`table_name` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',
......
--
-- Created by SQL::Translator::Producer::SQLite
-- Created on Fri May 30 13:08:11 2014
-- Created on Fri Dec 5 13:11:00 2014
--
BEGIN TRANSACTION;
......
--
-- Created by SQL::Translator::Producer::SQLite
-- Created on Tue Oct 28 16:45:58 2014
-- Created on Fri Dec 5 13:11:06 2014
--
BEGIN TRANSACTION;
......
1 \N schema_version 78
1 \N schema_version 79
2 1 assembly.default NCBI34
3 1 species.taxonomy_id 9606
26 1 species.classification Homo sapiens
......@@ -57,3 +57,4 @@
111 \N patch patch_77_78_a.sql|schema_version
112 \N patch patch_77_78_b.sql|source_column_increase
113 \N patch patch_77_78_c.sql|Change unmapped_reason_id from smallint to int
114 \N patch patch_78_79_a.sql|schema_version
......@@ -468,7 +468,7 @@ CREATE TABLE `meta` (
PRIMARY KEY (`meta_id`),
UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
KEY `species_value_idx` (`species_id`,`meta_value`)
) ENGINE=MyISAM AUTO_INCREMENT=114 DEFAULT CHARSET=latin1;
) ENGINE=MyISAM AUTO_INCREMENT=115 DEFAULT CHARSET=latin1;
CREATE TABLE `meta_coord` (
`table_name` varchar(40) NOT NULL,
......
--
-- Created by SQL::Translator::Producer::SQLite
-- Created on Tue Oct 28 16:46:06 2014
-- Created on Fri Dec 5 13:11:12 2014
--
BEGIN TRANSACTION;
......@@ -270,7 +270,8 @@ CREATE UNIQUE INDEX name_idx02 ON subset (name);
CREATE TABLE synonym (
synonym_id INTEGER PRIMARY KEY AUTOINCREMENT NOT NULL,
term_id integer NOT NULL,
name text NOT NULL
name text NOT NULL,
type enum
);
CREATE UNIQUE INDEX term_synonym_idx ON synonym (term_id, synonym_id);
......
--
-- Created by SQL::Translator::Producer::SQLite
-- Created on Tue Oct 28 16:46:13 2014
-- Created on Fri Dec 5 13:11:19 2014
--
BEGIN TRANSACTION;
......
......@@ -23,8 +23,9 @@
174 \N patch patch_77_78_a.sql|schema_version
175 \N patch patch_77_78_b.sql|source_column_increase
176 \N patch patch_77_78_c.sql|Change unmapped_reason_id from smallint to int
177 \N patch patch_78_79_a.sql|schema_version
1 \N schema_type core
2 \N schema_version 78
2 \N schema_version 79
8 1 assembly.accession GCA_000292705.1
10 1 assembly.date 2012-08
7 1 assembly.default GCA_000292705.1
......
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