extended memory limit for exonerate jobs

misc-scripts/xref_mapping/XrefMapper/Methods/ExonerateBasic.pm

@@ -123,7 +123,7 @@ sub resubmit_exonerate {
 
   my $queue = $self->mapper->farm_queue || 'long';
   
-  my $usage = '-R "select[linux] rusage[tmp='.$disk_space_needed.']" -J "'.$unique_name.'" -q '.$queue;
+  my $usage = '-M 1500000 -R"select[mem>1500] rusage[mem=1500:tmp='.$disk_space_needed.']" -J "'.$unique_name.'" -q '.$queue;
 
 
   my $com = "bsub $usage -o $root_dir/$outfile -e $root_dir/$errfile ".$exe_file;
@@ -265,7 +265,7 @@ EON
   my $queue = $self->mapper->farm_queue || 'long';
 
 
-  my $usage = "-q $queue ".'-R "-rusage[tmp='.$disk_space_needed.']" '.'-J "'.$unique_name.'[1-'.$num_jobs.']%200" -o '.$prefix.'.%J-%I.out -e  '.$prefix.'.%J-%I.err';
+  my $usage = "-q $queue ".'-M 1500000 -R"select[mem>1500] rusage[mem=1500:tmp='.$disk_space_needed.']" '.'-J "'.$unique_name.'[1-'.$num_jobs.']%200" -o '.$prefix.'.%J-%I.out -e  '.$prefix.'.%J-%I.err';
 
 
   my $command = $exe." ".$query." ".$target.' --querychunkid $LSB_JOBINDEX --querychunktotal '.$num_jobs.' --showvulgar false --showalignment FALSE --ryo "xref:%qi:%ti:%ei:%ql:%tl:%qab:%qae:%tab:%tae:%C:%s\n" '.$options_str;