Skip to content
Snippets Groups Projects
Commit de5b0b32 authored by Andreas Kusalananda Kähäri's avatar Andreas Kusalananda Kähäri
Browse files

Remove many uses of lc($logic_name). Use temp variable instead.

parent ff9e128e
No related branches found
No related tags found
No related merge requests found
Hide whitespace changes
Inline Side-by-side
misc-scripts/production_database/scripts/push_analysis_descriptions.pl
+ 54
− 53
View file @ de5b0b32
......@@ -86,9 +86,11 @@ my %master;
$sth->bind_columns( \( $logic_name, $description, $display_label ) );
while ( $sth->fetch() ) {
$master{ lc($logic_name) } = { 'logic_name' => $logic_name,
'description' => $description,
'display_label' => $display_label };
my $logic_name_lc = lc($logic_name);
$master{$logic_name_lc} = { 'logic_name' => $logic_name_lc,
'description' => $description,
'display_label' => $display_label };
}
}
......@@ -139,8 +141,10 @@ foreach my $server (@servers) {
\( $logic_name, $description, $display_label ) );
while ( $sth2->fetch() ) {
if ( exists( $master{ lc($logic_name) } )
&& $logic_name ne $master{ lc($logic_name) }{'logic_name'} )
my $logic_name_lc = lc($logic_name);
if ( exists( $master{$logic_name_lc} )
&& $logic_name ne $master{$logic_name_lc}{'logic_name'} )
{
# Wrong capitalization in analysis.logic_name.
......@@ -155,16 +159,15 @@ foreach my $server (@servers) {
. "UPDATE %s\n\t"
. "SET logic_name = %s\n\t"
. "WHERE logic_name = %s;\n\n",
lc($logic_name),
$logic_name_lc,
$dbh->quote_identifier(
undef, $dbname, 'analysis'
),
$dbh->quote( lc($logic_name), SQL_VARCHAR ),
$dbh->quote( $logic_name, SQL_VARCHAR ) )
);
$dbh->quote( $logic_name_lc, SQL_VARCHAR ),
$dbh->quote( $logic_name, SQL_VARCHAR ) ) );
}
if ( !exists( $master{ lc($logic_name) } ) ) {
if ( !exists( $master{$logic_name_lc} ) ) {
# Missing in master.
display_banner( '-', $dbname );
......@@ -182,25 +185,23 @@ foreach my $server (@servers) {
. "INSERT INTO %s (\n"
. "\tlogic_name, description, display_label\n) "
. "VALUES (\n\t%s,\n\t%s,\n\t%s\n);\n\n",
lc($logic_name),
$logic_name_lc,
$dbh->quote_identifier(
undef,
sprintf( 'ensembl_production_%d', $release ),
'analysis_description' ),
$dbh->quote( lc($logic_name), SQL_VARCHAR ),
$dbh->quote( $description, SQL_VARCHAR ),
$dbh->quote( $display_label, SQL_VARCHAR ) ) );
$master{ lc($logic_name) } = {
'logic_name' => lc($logic_name),
'description' => $description,
'display_label' => $display_label
$dbh->quote( $logic_name_lc, SQL_VARCHAR ),
$dbh->quote( $description, SQL_VARCHAR ),
$dbh->quote( $display_label, SQL_VARCHAR ) ) );
$master{$logic_name_lc} = { 'logic_name' => $logic_name_lc,
'description' => $description,
'display_label' => $display_label
};
} else {
# Compare all fields.
if (
$description ne $master{ lc($logic_name) }{'description'} )
if ( $description ne $master{$logic_name_lc}{'description'} )
{
# Description differs.
display_banner( '-', $dbname );
......@@ -209,30 +210,30 @@ foreach my $server (@servers) {
$logic_name );
printf( "==> In table:\t%s\n", $description );
printf( "==> In master:\t%s\n",
$master{ lc($logic_name) }{'description'} );
$master{$logic_name_lc}{'description'} );
push( @{ $sql{$dbname} },
sprintf(
"-- Updating description for logic_name '%s'\n"
. "UPDATE %s ad, %s a\n\t"
. "SET ad.description = %s\n\t"
. "WHERE a.logic_name = %s\n\t"
. "AND ad.analysis_id = a.analysis_id;\n\n",
lc($logic_name),
$dbh->quote_identifier(
"-- Updating description for logic_name '%s'\n"
. "UPDATE %s ad, %s a\n\t"
. "SET ad.description = %s\n\t"
. "WHERE a.logic_name = %s\n\t"
. "AND ad.analysis_id = a.analysis_id;\n\n",
$logic_name_lc,
$dbh->quote_identifier(
undef, $dbname, 'analysis_description'
),
$dbh->quote_identifier(
),
$dbh->quote_identifier(
undef, $dbname, 'analysis'
),
$dbh->quote(
$master{ lc($logic_name) }{'description'},
SQL_VARCHAR ),
$dbh->quote( lc($logic_name), SQL_VARCHAR ) ) );
),
$dbh->quote(
$master{$logic_name_lc}{'description'},
SQL_VARCHAR ),
$dbh->quote( $logic_name_lc, SQL_VARCHAR ) ) );
} ## end if ( $description ne $master...)
if ( $display_label ne
$master{ lc($logic_name) }{'display_label'} )
if (
$display_label ne $master{$logic_name_lc}{'display_label'} )
{
# Display label differs.
display_banner( '-', $dbname );
......@@ -241,25 +242,25 @@ foreach my $server (@servers) {
$logic_name );
printf( "==> In table:\t%s\n", $display_label );
printf( "==> In master:\t%s\n",
$master{ lc($logic_name) }{'display_label'} );
$master{$logic_name_lc}{'display_label'} );
push( @{ $sql{$dbname} },
sprintf(
"-- Updating display_label for logic_name '%s'\n"
. "UPDATE %s ad, %s a\n\t"
. "SET ad.display_label = %s\n\t"
. "WHERE a.logic_name = %s\n\t"
. "AND ad.analysis_id = a.analysis_id;\n\n",
lc($logic_name),
$dbh->quote_identifier(
"-- Updating display_label for logic_name '%s'\n"
. "UPDATE %s ad, %s a\n\t"
. "SET ad.display_label = %s\n\t"
. "WHERE a.logic_name = %s\n\t"
. "AND ad.analysis_id = a.analysis_id;\n\n",
$logic_name_lc,
$dbh->quote_identifier(
undef, $dbname, 'analysis_description'
),
$dbh->quote_identifier( undef, $dbname, 'analysis'
),
$dbh->quote(
$master{ lc($logic_name) }{'display_label'},
SQL_VARCHAR ),
$dbh->quote( lc($logic_name), SQL_VARCHAR ) ) );
),
$dbh->quote_identifier(undef, $dbname, 'analysis'
),
$dbh->quote(
$master{$logic_name_lc}{'display_label'},
SQL_VARCHAR ),
$dbh->quote( $logic_name_lc, SQL_VARCHAR ) ) );
} ## end if ( $display_label ne...)
} ## end else [ if ( !exists( $master{...}))]
......
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment