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Commit de75d0ba authored by Will Spooner's avatar Will Spooner
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Added support for parsing InterPro-to-SuperFamily links

parent bf345a86
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......@@ -109,10 +109,11 @@ sub run {
my ($members) = $_ =~ /<member_list>(.+)<\/member_list>/s;
while ( $members =~
/db="(PROSITE|PFAM|PRINTS|PREFILE|PROFILE|TIGRFAMs|PIRSF|SMART)"\s+dbkey="(\S+)"/cgm
/db="(PROSITE|PFAM|PRINTS|PREFILE|PROFILE|TIGRFAMs|PIRSF|SMART|SSF)"\s+dbkey="(\S+)"/cgm
)
{
my ( $db_type, $id ) = ( $1, $2 );
if( $db_type eq 'SSF' ){ $id =~ s/^SSF// } # Strip SSF prefix
if ( !get_xref( $get_interpro_sth, $interpro, $id ) ) {
$add_interpro_sth->execute( $interpro, $id );
......
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