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ensembl-gh-mirror
ensembl
Commits
ea744bd7
Commit
ea744bd7
authored
11 years ago
by
Kieron Taylor
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One more blunder in the saga that is alt_allele branch merge.
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sql/table.sql
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ea744bd7
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@@ -922,6 +922,23 @@ CREATE TABLE alt_allele (alt_allele_id INT UNSIGNED AUTO_INCREMENT,
@column attrib Enum of attributes assigned to alternative alleles
*/
CREATE
TABLE
alt_allele_attrib
(
alt_allele_id
INT
UNSIGNED
,
attrib
ENUM
(
'IS_REPRESENTATIVE'
,
'IS_MOST_COMMON_ALLELE'
,
'IN_CORRECTED_ASSEMBLY'
,
'HAS_CODING_POTENTIAL'
,
'IN_ARTIFICIALLY_DUPLICATED_ASSEMBLY'
,
'IN_SYNTENIC_REGION'
,
'HAS_SAME_UNDERLYING_DNA_SEQUENCE'
,
'IN_BROKEN_ASSEMBLY_REGION'
,
'IS_VALID_ALTERNATE'
,
'SAME_AS_REPRESENTATIVE'
,
'SAME_AS_ANOTHER_ALLELE'
,
'MANUALLY_ASSIGNED'
,
'AUTOMATICALLY_ASSIGNED'
),
KEY
aa_idx
(
alt_allele_id
,
attrib
)
)
COLLATE
=
latin1_swedish_ci
ENGINE
=
MyISAM
;
/**
@table alt_allele_group_id
@desc A minimal table used for tracking unique alt_allele_group_id's. MySQL does not allow multiple autoincrement fields. Further information about a group could be added here at a later date.
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