Change "$! = 1" into "$| = 1".

misc-scripts/analysis_description/apply_rules.pl

@@ -74,7 +74,7 @@ use Bio::EnsEMBL::Utils::Exception qw(warning throw);
 use Bio::EnsEMBL::DBSQL::DBAdaptor;
 use Bio::EnsEMBL::Gene;
 
-$! = 1;
+$| = 1;
 
 my ($dsn, $dbh, $update);
 # Analysis adaptors

misc-scripts/analysis_description/load_analysis_descriptions.pl

@@ -60,7 +60,7 @@ use Bio::EnsEMBL::Utils::Exception qw(warning throw);
 use Bio::EnsEMBL::DBSQL::DBAdaptor;
 use Bio::EnsEMBL::Gene;
 
-$! = 1;
+$| = 1;
 
 my ($dsn,$dbh);
 

misc-scripts/misc_feature/update_misc_set_descripitons.pl

@@ -50,7 +50,7 @@ use Bio::EnsEMBL::Utils::Exception qw(warning throw);
 use Bio::EnsEMBL::DBSQL::DBAdaptor;
 use Bio::EnsEMBL::Gene;
 
-$! = 1;
+$| = 1;
 
 my $dbhost = '';
 my $dbuser;