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Commit ef9c7f22 authored by Rhoda Kinsella's avatar Rhoda Kinsella
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Added DBASS3, DBASS5 and HPA databases

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......@@ -291,6 +291,30 @@ parser = CodelinkParser
release_uri =
data_uri = file:Codelink/GEHC_Amersham_CodeLink_RWG_300031.fna
[source DBASS5::homo_sapiens]
# Used by homo_sapiens
name = DBASS5
download = Y
order = 50
priority = 1
prio_descr = Database of aberrant 5\' splice sites.
parser = DBASSParser
release_uri =
data_uri = http://www.som.soton.ac.uk/research/geneticsdiv/dbass5/download.aspx?item=gene
[source DBASS3::homo_sapiens]
# Used by homo_sapiens
name = DBASS3
download = Y
order = 50
priority = 1
prio_descr = Database of aberrant 3\' splice sites.
parser = DBASSParser
release_uri =
data_uri = http://www.som.soton.ac.uk/research/geneticsdiv/dbass3/download.asp?item=gene
[source DEDb::drosophila_melanogaster]
# Used by drosophila_melanogaster
name = DEDb
......@@ -590,6 +614,19 @@ parser = GOParser
release_uri = http://www.ebi.ac.uk/GOA/RAT_release.html
data_uri = ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/RAT/gene_association.goa_rat.gz
[source HPA::homo_sapiens]
# Used by homo_sapiens
name = HPA
download = Y
order = 50
priority = 1
prio_descr = Human Protein Atlas (HPA) database
parser = HPAParser
release_uri =
data_uri = http://www.proteinatlas.org/data/xref.php
[source HGNC::homo_sapiens]
# Used by homo_sapiens
name = HGNC
......@@ -2460,8 +2497,11 @@ source = AgilentCGH::homo_sapiens
source = AgilentProbe::homo_sapiens
source = CCDS::MULTI
source = Codelink::homo_sapiens
source = DBASS5::homo_sapiens
source = DBASS3::homo_sapiens
source = EntrezGene::MULTI
source = GO::homo_sapiens
source = HPA::homo_sapiens
source = InterproGO::MULTI
source = HGNC::homo_sapiens
source = HGNC::homo_sapiens#01
......
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