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ensembl-gh-mirror
ensembl
Commits
f2574a32
Commit
f2574a32
authored
Oct 20, 2009
by
Andreas Kusalananda Kähäri
Browse files
Add a simple to use wrapper script for "manage_id_mapping_tables.pl".
parent
018250d3
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misc-scripts/id_mapping/utils/myManager.ksh
misc-scripts/id_mapping/utils/myManager.ksh
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misc-scripts/id_mapping/utils/myManager.ksh
0 → 100755
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f2574a32
#!/bin/ksh
function
usage
{
cat
<<
EOT
Usage:
$0
-h dbhost -P dbport -u dbuser -p dbpass -d dbname
EOT
}
if
[[
!
-e
./manage_id_mapping_tables.pl
]]
;
then
print
-u2
"Expected to find the following executable file here:"
print
-u2
"
\t
manage_id_mapping_tables.pl"
exit
fi
dbport
=
3306
while
getopts
'h:u:p:a:j:d:r:P:oci'
opt
;
do
case
${
opt
}
in
h
)
dbhost
=
${
OPTARG
}
;;
P
)
dbport
=
${
OPTARG
}
;;
u
)
dbuser
=
${
OPTARG
}
;;
p
)
dbpass
=
${
OPTARG
}
;;
d
)
dbname
=
${
OPTARG
}
;;
*
)
usage
;
exit
;;
esac
done
if
[[
-z
${
dbhost
}
||
-z
${
dbport
}
||
-z
${
dbuser
}
||
-z
${
dbpass
}
||
-z
${
dbname
}
]]
;
then
usage
exit
fi
./manage_id_mapping_tables.pl
\
-host
${
dbhost
}
\
-port
${
dbport
}
\
-user
${
dbuser
}
\
-pass
${
dbpass
}
\
-dbname
${
dbname
}
# $Id$
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