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ensembl-gh-mirror
ensembl
Commits
f2c64123
Commit
f2c64123
authored
17 years ago
by
Will Spooner
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Updates due to go_xref schema change
parent
1f760285
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modules/t/test-genome-DBs/homo_sapiens/core/go_xref.sql
+6
-5
6 additions, 5 deletions
modules/t/test-genome-DBs/homo_sapiens/core/go_xref.sql
modules/t/test-genome-DBs/homo_sapiens/core/go_xref.txt
+49
-49
49 additions, 49 deletions
modules/t/test-genome-DBs/homo_sapiens/core/go_xref.txt
with
55 additions
and
54 deletions
modules/t/test-genome-DBs/homo_sapiens/core/go_xref.sql
+
6
−
5
View file @
f2c64123
CREATE
TABLE
`go_xref`
(
`object_xref_id`
int
(
10
)
unsigned
NOT
NULL
default
'0'
,
`linkage_type`
enum
(
'IC'
,
'IDA'
,
'IEA'
,
'IEP'
,
'IGI'
,
'IMP'
,
'IPI'
,
'ISS'
,
'NAS'
,
'ND'
,
'TAS'
,
'NR'
,
'RCA'
)
collate
latin1_bin
NOT
NULL
default
'IC'
,
UNIQUE
KEY
`object_xref_id_2`
(
`object_xref_id`
,
`linkage_type`
),
KEY
`object_xref_id`
(
`object_xref_id`
)
)
ENGINE
=
MyISAM
DEFAULT
CHARSET
=
latin1
COLLATE
=
latin1_bin
;
`linkage_type`
enum
(
'IC'
,
'IDA'
,
'IEA'
,
'IEP'
,
'IGI'
,
'IMP'
,
'IPI'
,
'ISS'
,
'NAS'
,
'ND'
,
'TAS'
,
'NR'
,
'RCA'
)
NOT
NULL
,
`source_xref_id`
int
(
10
)
unsigned
default
NULL
,
UNIQUE
KEY
`object_xref_id_2`
(
`object_xref_id`
,
`source_xref_id`
,
`linkage_type`
),
KEY
`object_xref_id`
(
`object_xref_id`
),
KEY
`source_xref_id`
(
`source_xref_id`
)
)
ENGINE
=
MyISAM
DEFAULT
CHARSET
=
latin1
;
This diff is collapsed.
Click to expand it.
modules/t/test-genome-DBs/homo_sapiens/core/go_xref.txt
+
49
−
49
View file @
f2c64123
22988 IC
22988 IEA
22989 IEA
22990 IC
22991 IEA
22992 IC
22993 IEA
22994 IC
41176 IEA
41177 IDA
41178 IEA
41179 IC
41180 IEA
41181 IEA
41182 IDA
41183 IC
83268 IEA
83269 IEA
83270 IDA
149843 IDA
151219 IDA
151220 IC
151221 IDA
151222 IC
151223 IEA
151224 IC
179294 IDA
179295 IEA
179296 IC
191222 IEA
191223 IC
191224 IC
191225 IC
191226 IDA
191227 IDA
191244 IEA
191245 IDA
191246 IC
229064 IDA
229065 IC
229077 IDA
229078 IC
238791 IC
238792 IDA
238793 IDA
238794 IC
238795 IDA
238796 IEA
238797 IDA
22988 IC
\N
22988 IEA
\N
22989 IEA
\N
22990 IC
\N
22991 IEA
\N
22992 IC
\N
22993 IEA
\N
22994 IC
\N
41176 IEA
\N
41177 IDA
\N
41178 IEA
\N
41179 IC
\N
41180 IEA
\N
41181 IEA
\N
41182 IDA
\N
41183 IC
\N
83268 IEA
\N
83269 IEA
\N
83270 IDA
\N
149843 IDA
\N
151219 IDA
\N
151220 IC
\N
151221 IDA
\N
151222 IC
\N
151223 IEA
\N
151224 IC
\N
179294 IDA
\N
179295 IEA
\N
179296 IC
\N
191222 IEA
\N
191223 IC
\N
191224 IC
\N
191225 IC
\N
191226 IDA
\N
191227 IDA
\N
191244 IEA
\N
191245 IDA
\N
191246 IC
\N
229064 IDA
\N
229065 IC
\N
229077 IDA
\N
229078 IC
\N
238791 IC
\N
238792 IDA
\N
238793 IDA
\N
238794 IC
\N
238795 IDA
\N
238796 IEA
\N
238797 IDA
\N
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