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Commit f40f8e7e authored by Monika Komorowska's avatar Monika Komorowska
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added another ignore sql statement for Uniprot/SPTREMBL priority_description protein_evidence_gt_3

parent 1957b5b5
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......@@ -40,6 +40,14 @@ sub transcript_display_xref_sources {
Uniprot/SPTREMBL);
my %ignore;
$ignore{"Uniprot/SPTREMBL"} =(<<BIGN);
SELECT object_xref_id
FROM object_xref JOIN xref USING(xref_id) JOIN source USING(source_id)
WHERE ox_status = 'DUMP_OUT' AND name = 'Uniprot/SPTREMBL'
AND priority_description = 'protein_evidence_gt_3'
BIGN
return [\@list,\%ignore];
}
......
......@@ -91,6 +91,24 @@ sub transcript_display_xref_sources {
EntrezGene);
my %ignore;
$ignore{"EntrezGene"} =(<<AIGN);
SELECT ox.object_xref_id
FROM object_xref ox, dependent_xref dx, source s1, xref x1, source s2, xref x2
WHERE ox.object_xref_id = dx.object_xref_id AND dx.dependent_xref_id = x1.xref_id
AND x1.source_id = s1.source_id and s1.name = 'EntrezGene'
AND x2.xref_id = dx.master_xref_id and x2.source_id = s2.source_id
AND (s2.name like 'Refseq_dna_predicted' or s2.name like 'RefSeq_peptide_predicted')
AND ox.ox_status = 'DUMP_OUT'
AIGN
$ignore{"Uniprot/SPTREMBL"} =(<<BIGN);
SELECT object_xref_id
FROM object_xref JOIN xref USING(xref_id) JOIN source USING(source_id)
WHERE ox_status = 'DUMP_OUT' AND name = 'Uniprot/SPTREMBL'
AND priority_description = 'protein_evidence_gt_3'
BIGN
return [\@list,\%ignore];
......
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