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ensembl-gh-mirror
ensembl
Commits
f5c96618
Commit
f5c96618
authored
6 years ago
by
Magali Ruffier
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ENSCORESW-2850
: update usage with all options
parent
8293dad6
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4 merge requests
!342
Feature/schema update 96
,
!295
ENSCORESW-2850: optimised for single species run
,
!342
Feature/schema update 96
,
!295
ENSCORESW-2850: optimised for single species run
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misc-scripts/xref_mapping/xref_parser.pl
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f5c96618
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@@ -167,6 +167,14 @@ sub usage {
Specifying
an
unknown
species
will
cause
a
list
of
valid
species
to
be
printed
.
-
taxon
Which
taxon
to
import
.
Can
be
used
as
an
alternative
to
species
.
-
division
Which
division
the
species
belongs
to
.
This
defines
which
sources
will
be
parsed
and
does
not
necessarily
imply
taxonomic
relationship
(
e
.
g
.
ciona
intestinalis
is
a
vertebrate
in
this
context
)
-
source
Which
sources
to
import
.
Multiple
-
source
arguments
and
/
or
comma
,
separated
lists
of
sources
are
allowed
.
Specifying
an
unknown
source
will
cause
a
...
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