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ensembl-gh-mirror
ensembl
Commits
f71f5647
Commit
f71f5647
authored
18 years ago
by
Seth Redmond
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updated VB array names for Mart consistency
parent
7a15a4d2
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2 changed files
misc-scripts/external_db/external_dbs.txt
+6
-6
6 additions, 6 deletions
misc-scripts/external_db/external_dbs.txt
misc-scripts/xref_mapping/sql/populate_metadata.sql
+5
-5
5 additions, 5 deletions
misc-scripts/xref_mapping/sql/populate_metadata.sql
with
11 additions
and
11 deletions
misc-scripts/external_db/external_dbs.txt
+
6
−
6
View file @
f71f5647
...
...
@@ -127,12 +127,12 @@
3200 VB_array 1 XREF 1 0 1 VectorBase Array
3201 ARRAY_EMBL_MMC1_20k_v1 1 XREF 1 0 1 VectorBase Array
3202 ARRAY_EMBL_MMC2_12k_v1 1 XREF 1 0 1 VectorBase Array
3203 ARRAY_JHU_GAM3
.
0_21k_v1 1 XREF 1 0 1 VectorBase Array
3204 ARRAY_LIV_GAMDETOX_0
.
25k_v1 1 XREF 1 0 1 VectorBase Array
3205 ARRAY_JHU_AEG1
.
0_20k_v1 1 XREF 1 0 1 VectorBase Array
3206 ARRAY_LIV_AEGDETOX_0
.
25k_v1 1 XREF 1 0 1 VectorBase Array
3207 ARRAY_ND_TIGRTC_9
.
6K_v1 1 XREF 1 0 1 VectorBase Array
3208 ARRAY_UCR_GillMgMT_0
.
2K_v2 1 XREF 1 0 1 VectorBase Array
3203 ARRAY_JHU_GAM3
_
0_21k_v1 1 XREF 1 0 1 VectorBase Array
3204 ARRAY_LIV_GAMDETOX_0
_
25k_v1 1 XREF 1 0 1 VectorBase Array
3205 ARRAY_JHU_AEG1
_
0_20k_v1 1 XREF 1 0 1 VectorBase Array
3206 ARRAY_LIV_AEGDETOX_0
_
25k_v1 1 XREF 1 0 1 VectorBase Array
3207 ARRAY_ND_TIGRTC_9
_
6K_v1 1 XREF 1 0 1 VectorBase Array
3208 ARRAY_UCR_GillMgMT_0
_
2K_v2 1 XREF 1 0 1 VectorBase Array
3250 Illumina 1 XREF 1 0 1 Illumina
3251 AGILENT_G2518A 1 XREF 1 0 1 Agilent Microarray G2518A
3300 miRNA_Registry 1 XREF 1 0 1 miRNA Registry
...
...
This diff is collapsed.
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misc-scripts/xref_mapping/sql/populate_metadata.sql
+
5
−
5
View file @
f71f5647
...
...
@@ -128,8 +128,8 @@ INSERT INTO source VALUES (2611, 'cint_aniseed_jgi_v2', 1, 'Y', 50, 1, "");
#
predicted
versions
of
Uniprot
/
EMBL
-
created
as
dependent
in
appropriate
parse
INSERT
INTO
source
VALUES
(
2857
,
"ARRAY_EMBL_MMC1_20k_v1"
,
1
,
'Y'
,
40
,
1
,
""
);
INSERT
INTO
source
VALUES
(
2858
,
"ARRAY_EMBL_MMC2_12k_v1"
,
1
,
'Y'
,
40
,
1
,
""
);
INSERT
INTO
source
VALUES
(
2859
,
"ARRAY_JHU_GAM3
.
0_21k_v1"
,
1
,
'Y'
,
40
,
1
,
""
);
INSERT
INTO
source
VALUES
(
2860
,
"ARRAY_LIV_GAMDETOX_0
.
25k_v1"
,
1
,
'Y'
,
40
,
1
,
""
);
INSERT
INTO
source
VALUES
(
2859
,
"ARRAY_JHU_GAM3
_
0_21k_v1"
,
1
,
'Y'
,
40
,
1
,
""
);
INSERT
INTO
source
VALUES
(
2860
,
"ARRAY_LIV_GAMDETOX_0
_
25k_v1"
,
1
,
'Y'
,
40
,
1
,
""
);
INSERT
INTO
source
VALUES
(
2801
,
"Uniprot/SWISSPROT_predicted"
,
1
,
'N'
,
20
,
1
,
""
);
INSERT
INTO
source
VALUES
(
2802
,
"Uniprot/SPTREMBL_predicted"
,
1
,
'N'
,
20
,
1
,
""
);
INSERT
INTO
source
VALUES
(
2810
,
"EMBL_predicted"
,
1
,
'N'
,
20
,
1
,
""
);
...
...
@@ -142,9 +142,9 @@ INSERT INTO source VALUES (2856, "Anopheles_symbol", 1, 'Y', 40, 1, "");
#
aedes
aegypti
INSERT
INTO
source
VALUES
(
7159
,
'AedesGenBank'
,
'1'
,
'Y'
,
'30'
,
1
,
""
)
;
INSERT
INTO
source
VALUES
(
2861
,
"ARRAY_JHU_AEG1.0_20k_v1"
,
1
,
'Y'
,
40
,
1
,
""
);
INSERT
INTO
source
VALUES
(
2862
,
"ARRAY_LIV_AEGDETOX_0
.
25k_v1"
,
1
,
'Y'
,
40
,
1
,
""
);
INSERT
INTO
source
VALUES
(
2863
,
"ARRAY_ND_TIGRTC_9
.
6K_v1"
,
1
,
'Y'
,
40
,
1
,
""
);
INSERT
INTO
source
VALUES
(
2864
,
"ARRAY_UCR_GillMgMT_0
.
2K_v2"
,
1
,
'Y'
,
40
,
1
,
""
);
INSERT
INTO
source
VALUES
(
2862
,
"ARRAY_LIV_AEGDETOX_0
_
25k_v1"
,
1
,
'Y'
,
40
,
1
,
""
);
INSERT
INTO
source
VALUES
(
2863
,
"ARRAY_ND_TIGRTC_9
_
6K_v1"
,
1
,
'Y'
,
40
,
1
,
""
);
INSERT
INTO
source
VALUES
(
2864
,
"ARRAY_UCR_GillMgMT_0
_
2K_v2"
,
1
,
'Y'
,
40
,
1
,
""
);
#
Uniprot
alternative
splice
INSERT
INTO
source
VALUES
(
3000
,
"Uniprot/Varsplic"
,
1
,
'Y'
,
20
,
1
,
""
);
...
...
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