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ensembl-gh-mirror
ensembl
Commits
fabf1582
Commit
fabf1582
authored
Sep 26, 2018
by
Marek Szuba
Browse files
Patch the test databases to include patch_94_95_b.sql
parent
ac3d2688
Changes
29
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20 changed files
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21 additions
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15 deletions
+21
-15
modules/t/test-genome-DBs/circ/core/SQLite/table.sql
modules/t/test-genome-DBs/circ/core/SQLite/table.sql
+1
-1
modules/t/test-genome-DBs/circ/core/meta.txt
modules/t/test-genome-DBs/circ/core/meta.txt
+1
-0
modules/t/test-genome-DBs/circ/core/table.sql
modules/t/test-genome-DBs/circ/core/table.sql
+1
-1
modules/t/test-genome-DBs/homo_sapiens/core/SQLite/table.sql
modules/t/test-genome-DBs/homo_sapiens/core/SQLite/table.sql
+1
-1
modules/t/test-genome-DBs/homo_sapiens/core/meta.txt
modules/t/test-genome-DBs/homo_sapiens/core/meta.txt
+1
-0
modules/t/test-genome-DBs/homo_sapiens/core/table.sql
modules/t/test-genome-DBs/homo_sapiens/core/table.sql
+1
-1
modules/t/test-genome-DBs/homo_sapiens/empty/SQLite/table.sql
...les/t/test-genome-DBs/homo_sapiens/empty/SQLite/table.sql
+1
-1
modules/t/test-genome-DBs/homo_sapiens/empty/meta.txt
modules/t/test-genome-DBs/homo_sapiens/empty/meta.txt
+1
-0
modules/t/test-genome-DBs/homo_sapiens/empty/table.sql
modules/t/test-genome-DBs/homo_sapiens/empty/table.sql
+1
-1
modules/t/test-genome-DBs/homo_sapiens/patch/SQLite/table.sql
...les/t/test-genome-DBs/homo_sapiens/patch/SQLite/table.sql
+1
-1
modules/t/test-genome-DBs/homo_sapiens/patch/meta.txt
modules/t/test-genome-DBs/homo_sapiens/patch/meta.txt
+1
-0
modules/t/test-genome-DBs/homo_sapiens/patch/table.sql
modules/t/test-genome-DBs/homo_sapiens/patch/table.sql
+1
-1
modules/t/test-genome-DBs/mapping/core/SQLite/table.sql
modules/t/test-genome-DBs/mapping/core/SQLite/table.sql
+1
-1
modules/t/test-genome-DBs/mapping/core/meta.txt
modules/t/test-genome-DBs/mapping/core/meta.txt
+1
-0
modules/t/test-genome-DBs/mapping/core/table.sql
modules/t/test-genome-DBs/mapping/core/table.sql
+1
-1
modules/t/test-genome-DBs/multi/compara/SQLite/table.sql
modules/t/test-genome-DBs/multi/compara/SQLite/table.sql
+1
-1
modules/t/test-genome-DBs/mus_musculus/core/SQLite/table.sql
modules/t/test-genome-DBs/mus_musculus/core/SQLite/table.sql
+1
-1
modules/t/test-genome-DBs/mus_musculus/core/meta.txt
modules/t/test-genome-DBs/mus_musculus/core/meta.txt
+2
-1
modules/t/test-genome-DBs/mus_musculus/core/table.sql
modules/t/test-genome-DBs/mus_musculus/core/table.sql
+1
-1
modules/t/test-genome-DBs/nameless/core/SQLite/table.sql
modules/t/test-genome-DBs/nameless/core/SQLite/table.sql
+1
-1
No files found.
modules/t/test-genome-DBs/circ/core/SQLite/table.sql
View file @
fabf1582
--
-- Created by SQL::Translator::Producer::SQLite
-- Created on Wed Sep 26 1
2:06:22
2018
-- Created on Wed Sep 26 1
6:18:37
2018
--
BEGIN
TRANSACTION
;
...
...
modules/t/test-genome-DBs/circ/core/meta.txt
View file @
fabf1582
...
...
@@ -123,3 +123,4 @@
123 \N patch patch_93_94_b.sql|nullable_ox_analysis
124 \N patch patch_93_94_c.sql|default_aln_type
125 \N patch patch_94_95_a.sql|schema_version
126 \N patch patch_94_95_b.sql|vertebrate_division_rename
modules/t/test-genome-DBs/circ/core/table.sql
View file @
fabf1582
...
...
@@ -489,7 +489,7 @@ CREATE TABLE `meta` (
PRIMARY
KEY
(
`meta_id`
),
UNIQUE
KEY
`species_key_value_idx`
(
`species_id`
,
`meta_key`
,
`meta_value`
),
KEY
`species_value_idx`
(
`species_id`
,
`meta_value`
)
)
ENGINE
=
MyISAM
AUTO_INCREMENT
=
12
6
DEFAULT
CHARSET
=
latin1
;
)
ENGINE
=
MyISAM
AUTO_INCREMENT
=
12
7
DEFAULT
CHARSET
=
latin1
;
CREATE
TABLE
`meta_coord`
(
`table_name`
varchar
(
40
)
COLLATE
latin1_bin
NOT
NULL
DEFAULT
''
,
...
...
modules/t/test-genome-DBs/homo_sapiens/core/SQLite/table.sql
View file @
fabf1582
--
-- Created by SQL::Translator::Producer::SQLite
-- Created on Wed Sep 26 1
2:06:31
2018
-- Created on Wed Sep 26 1
6:18:44
2018
--
BEGIN
TRANSACTION
;
...
...
modules/t/test-genome-DBs/homo_sapiens/core/meta.txt
View file @
fabf1582
...
...
@@ -102,3 +102,4 @@
169 \N patch patch_93_94_b.sql|nullable_ox_analysis
170 \N patch patch_93_94_c.sql|default_aln_type
171 \N patch patch_94_95_a.sql|schema_version
172 \N patch patch_94_95_b.sql|vertebrate_division_rename
modules/t/test-genome-DBs/homo_sapiens/core/table.sql
View file @
fabf1582
...
...
@@ -489,7 +489,7 @@ CREATE TABLE `meta` (
PRIMARY
KEY
(
`meta_id`
),
UNIQUE
KEY
`species_key_value_idx`
(
`species_id`
,
`meta_key`
,
`meta_value`
),
KEY
`species_value_idx`
(
`species_id`
,
`meta_value`
)
)
ENGINE
=
MyISAM
AUTO_INCREMENT
=
17
2
DEFAULT
CHARSET
=
latin1
;
)
ENGINE
=
MyISAM
AUTO_INCREMENT
=
17
3
DEFAULT
CHARSET
=
latin1
;
CREATE
TABLE
`meta_coord`
(
`table_name`
varchar
(
40
)
COLLATE
latin1_bin
NOT
NULL
DEFAULT
''
,
...
...
modules/t/test-genome-DBs/homo_sapiens/empty/SQLite/table.sql
View file @
fabf1582
--
-- Created by SQL::Translator::Producer::SQLite
-- Created on Wed Sep 26 1
2:06:39
2018
-- Created on Wed Sep 26 1
6:18:52
2018
--
BEGIN
TRANSACTION
;
...
...
modules/t/test-genome-DBs/homo_sapiens/empty/meta.txt
View file @
fabf1582
...
...
@@ -102,3 +102,4 @@
151 \N patch patch_93_94_b.sql|nullable_ox_analysis
152 \N patch patch_93_94_c.sql|default_aln_type
153 \N patch patch_94_95_a.sql|schema_version
154 \N patch patch_94_95_b.sql|vertebrate_division_rename
modules/t/test-genome-DBs/homo_sapiens/empty/table.sql
View file @
fabf1582
...
...
@@ -489,7 +489,7 @@ CREATE TABLE `meta` (
PRIMARY
KEY
(
`meta_id`
),
UNIQUE
KEY
`species_key_value_idx`
(
`species_id`
,
`meta_key`
,
`meta_value`
),
KEY
`species_value_idx`
(
`species_id`
,
`meta_value`
)
)
ENGINE
=
MyISAM
AUTO_INCREMENT
=
15
4
DEFAULT
CHARSET
=
latin1
;
)
ENGINE
=
MyISAM
AUTO_INCREMENT
=
15
5
DEFAULT
CHARSET
=
latin1
;
CREATE
TABLE
`meta_coord`
(
`table_name`
varchar
(
40
)
COLLATE
latin1_bin
NOT
NULL
DEFAULT
''
,
...
...
modules/t/test-genome-DBs/homo_sapiens/patch/SQLite/table.sql
View file @
fabf1582
--
-- Created by SQL::Translator::Producer::SQLite
-- Created on Wed Sep 26 1
2:06:47
2018
-- Created on Wed Sep 26 1
6:18:59
2018
--
BEGIN
TRANSACTION
;
...
...
modules/t/test-genome-DBs/homo_sapiens/patch/meta.txt
View file @
fabf1582
...
...
@@ -107,3 +107,4 @@
2114 \N patch patch_93_94_b.sql|nullable_ox_analysis
2115 \N patch patch_93_94_c.sql|default_aln_type
2116 \N patch patch_94_95_a.sql|schema_version
2117 \N patch patch_94_95_b.sql|vertebrate_division_rename
modules/t/test-genome-DBs/homo_sapiens/patch/table.sql
View file @
fabf1582
...
...
@@ -489,7 +489,7 @@ CREATE TABLE `meta` (
PRIMARY
KEY
(
`meta_id`
),
UNIQUE
KEY
`species_key_value_idx`
(
`species_id`
,
`meta_key`
,
`meta_value`
),
KEY
`species_value_idx`
(
`species_id`
,
`meta_value`
)
)
ENGINE
=
MyISAM
AUTO_INCREMENT
=
211
7
DEFAULT
CHARSET
=
latin1
;
)
ENGINE
=
MyISAM
AUTO_INCREMENT
=
211
8
DEFAULT
CHARSET
=
latin1
;
CREATE
TABLE
`meta_coord`
(
`table_name`
varchar
(
40
)
COLLATE
latin1_bin
NOT
NULL
DEFAULT
''
,
...
...
modules/t/test-genome-DBs/mapping/core/SQLite/table.sql
View file @
fabf1582
--
-- Created by SQL::Translator::Producer::SQLite
-- Created on Wed Sep 26 1
2:06:56
2018
-- Created on Wed Sep 26 1
6:19:07
2018
--
BEGIN
TRANSACTION
;
...
...
modules/t/test-genome-DBs/mapping/core/meta.txt
View file @
fabf1582
...
...
@@ -63,3 +63,4 @@
156 \N patch patch_93_94_b.sql|nullable_ox_analysis
157 \N patch patch_93_94_c.sql|default_aln_type
158 \N patch patch_94_95_a.sql|schema_version
159 \N patch patch_94_95_b.sql|vertebrate_division_rename
modules/t/test-genome-DBs/mapping/core/table.sql
View file @
fabf1582
...
...
@@ -489,7 +489,7 @@ CREATE TABLE `meta` (
PRIMARY
KEY
(
`meta_id`
),
UNIQUE
KEY
`species_key_value_idx`
(
`species_id`
,
`meta_key`
,
`meta_value`
),
KEY
`species_value_idx`
(
`species_id`
,
`meta_value`
)
)
ENGINE
=
MyISAM
AUTO_INCREMENT
=
1
59
DEFAULT
CHARSET
=
latin1
;
)
ENGINE
=
MyISAM
AUTO_INCREMENT
=
1
60
DEFAULT
CHARSET
=
latin1
;
CREATE
TABLE
`meta_coord`
(
`table_name`
varchar
(
40
)
COLLATE
latin1_bin
NOT
NULL
DEFAULT
''
,
...
...
modules/t/test-genome-DBs/multi/compara/SQLite/table.sql
View file @
fabf1582
--
-- Created by SQL::Translator::Producer::SQLite
-- Created on Wed Sep 26 1
2:07:04
2018
-- Created on Wed Sep 26 1
6:19:13
2018
--
BEGIN
TRANSACTION
;
...
...
modules/t/test-genome-DBs/mus_musculus/core/SQLite/table.sql
View file @
fabf1582
--
-- Created by SQL::Translator::Producer::SQLite
-- Created on Wed Sep 26 1
2:07:12
2018
-- Created on Wed Sep 26 1
6:19:20
2018
--
BEGIN
TRANSACTION
;
...
...
modules/t/test-genome-DBs/mus_musculus/core/meta.txt
View file @
fabf1582
...
...
@@ -145,7 +145,7 @@
1652 1 species.classification Metazoa
1653 1 species.classification Opisthokonta
1654 1 species.classification Eukaryota
1660 1 species.division Ensembl
1660 1 species.division Ensembl
Vertebrates
1661 \N patch patch_82_83_a.sql|schema_version
1662 \N patch patch_83_84_a.sql|schema_version
1663 \N patch patch_83_84_b.sql|xref.version_default
...
...
@@ -180,3 +180,4 @@
1692 \N patch patch_93_94_b.sql|nullable_ox_analysis
1693 \N patch patch_93_94_c.sql|default_aln_type
1694 \N patch patch_94_95_a.sql|schema_version
1695 \N patch patch_94_95_b.sql|vertebrate_division_rename
modules/t/test-genome-DBs/mus_musculus/core/table.sql
View file @
fabf1582
...
...
@@ -489,7 +489,7 @@ CREATE TABLE `meta` (
PRIMARY
KEY
(
`meta_id`
),
UNIQUE
KEY
`species_key_value_idx`
(
`species_id`
,
`meta_key`
,
`meta_value`
),
KEY
`species_value_idx`
(
`species_id`
,
`meta_value`
)
)
ENGINE
=
MyISAM
AUTO_INCREMENT
=
169
5
DEFAULT
CHARSET
=
latin1
;
)
ENGINE
=
MyISAM
AUTO_INCREMENT
=
169
6
DEFAULT
CHARSET
=
latin1
;
CREATE
TABLE
`meta_coord`
(
`table_name`
varchar
(
40
)
COLLATE
latin1_bin
NOT
NULL
DEFAULT
''
,
...
...
modules/t/test-genome-DBs/nameless/core/SQLite/table.sql
View file @
fabf1582
--
-- Created by SQL::Translator::Producer::SQLite
-- Created on Wed Sep 26 1
2:07
:2
0
2018
-- Created on Wed Sep 26 1
6:19
:2
7
2018
--
BEGIN
TRANSACTION
;
...
...
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