Commits · 1e9f75f9ff256f40677e9c8fb1b5e996362e3057 · ensembl-gh-mirror / ensembl

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May 30, 2003
- eval sql connection to see if table does exist - it doesnt have to · 1e9f75f9
  Web Admin authored 21 years ago
  
  1e9f75f9
May 29, 2003
- Getting the ArchiveStableId Adaptor · 072d45dc
  Arne Stabenau authored 21 years ago
  
  072d45dc
- bug fix · 3f294074
  Arne Stabenau authored 21 years ago
  
  3f294074
- fixed the method guess phases... still pretty dodgy · 99b2c5f0
  Emmanuel Mongin authored 21 years ago
  
  99b2c5f0
May 28, 2003
- bugfix · 10818107
  Arne Stabenau authored 21 years ago
  
  10818107
- stable_id_events, mapping_sessions, gene_archive, peptide_archive added · 0f3f92b6
  Arne Stabenau authored 21 years ago
  
  0f3f92b6
- Test file for archiveStableIds and adaptor · 29364805
  Arne Stabenau authored 21 years ago
  
  29364805
- Added some docs · d2a623a0
  Arne Stabenau authored 21 years ago
  
  d2a623a0
May 27, 2003
- Renamed a function · 1081d2cc
  Arne Stabenau authored 21 years ago
  
  1081d2cc
- Added some comments, some functions got renamed. · eb22cdf1
  Arne Stabenau authored 21 years ago
  
  eb22cdf1
- Core interaction with stable id archive done. Comments added. · 9540df46
  Arne Stabenau authored 21 years ago
  
  9540df46
- Deprecated script · bf2754ce
  Abel Ureta-Vidal authored 21 years ago
  
  bf2754ce
- Deprecated script · 2bed7638
  Abel Ureta-Vidal authored 21 years ago
  
  2bed7638
May 22, 2003
- returns undef if a seq is made of polyA or polyT only. such a thing should not be kept · 722d1469
  Eduardo Eyras authored 21 years ago
  
  722d1469
- clip_ends method moved elsewhere · 2a03e08d
  Eduardo Eyras authored 21 years ago
  
  2a03e08d
- added method to clip sequences on both ends, the length to be clipped is passed as an argument · dfe5663c
  Eduardo Eyras authored 21 years ago
  
  dfe5663c
- minor changes towards 14 release · f096291e
  Arne Stabenau authored 21 years ago
  
  f096291e
May 21, 2003
- added fetch_by_stable_id method · 1abbe87c
  Graham McVicker authored 21 years ago
  
  1abbe87c
- added test for PredictionTranscriptAdaptor::fetch_by_stable_id · ddcc52da
  Graham McVicker authored 21 years ago
  
  ddcc52da
- added update_key_value method · 4b0183f7
  Abel Ureta-Vidal authored 21 years ago
  
  4b0183f7
- Schema 14 table.sql · 3b131965
  Arne Stabenau authored 21 years ago
  
  3b131965
May 20, 2003
- missing 1; · da77ad4b
  Graham McVicker authored 21 years ago
  
  da77ad4b
May 19, 2003
- change DESTROY so that forked processes don't disconnect parent's db handle · 6951b02b
  Graham McVicker authored 21 years ago
  
  6951b02b
- non-intuitive map_weight calculation script · 0b3b449c
  Graham McVicker authored 21 years ago
  
  0b3b449c
May 16, 2003
- removed typos, test run · 9b5a0ac2
  Arne Stabenau authored 21 years ago
  
  9b5a0ac2
- allow prediction transcripts to be computed in slice coords and transformed to... · 23942d6b
  Graham McVicker authored 21 years ago
```
allow prediction transcripts to be computed in slice coords and transformed to raw contig coords - untested
```
  23942d6b
May 15, 2003
- Made it much more robust · 48bd635f
  Abel Ureta-Vidal authored 21 years ago
  
  48bd635f
May 13, 2003
- modules to run the archive, not finished, not compiling · c070ea28
  Arne Stabenau authored 21 years ago
  
  c070ea28
May 09, 2003
- fixed line 177 from $sth to $synonym_check_sth · eafbcea4
  Kerstin Howe authored 21 years ago
  
  eafbcea4
- added zebrafish specific options · 9ac1f3be
  Kerstin Howe authored 21 years ago
  
  9ac1f3be
- changed/added zebrafish specific options · f7196b27
  Kerstin Howe authored 21 years ago
  
  f7196b27
May 07, 2003
- updated get_all_compara_DnaAlignFeatures method that have now 2 arguments as... · 6b8ec0ef
  Abel Ureta-Vidal authored 21 years ago
```
updated get_all_compara_DnaAlignFeatures method that have now 2 arguments as consequence of compara schema change when storing Dna alignments
```
  6b8ec0ef
- short script to get predicted sequence being potentially transposons or lying... · 19531a98
  Emmanuel Mongin authored 21 years ago
```
short script to get predicted sequence being potentially transposons or lying on bacterial contaminants
```
  19531a98
May 06, 2003
- Script to do easy copy of mysql dbs over server. Very well needed during the release coordination · d461a014
  Abel Ureta-Vidal authored 21 years ago
  
  d461a014
May 02, 2003
- script to convert old-style xrefs to new · e94e2792
  Graham McVicker authored 21 years ago
  
  e94e2792
- scripts and instructions for external_db/additional xref loading · a5425590
  Graham McVicker authored 21 years ago
  
  a5425590
- white space and warns · 60c4aeab
  Web Admin authored 21 years ago
  
  60c4aeab
May 01, 2003
- functional new method for making empty object · 070cc30a
  James Gilbert authored 21 years ago
  
  070cc30a
- Speed improvement on Gene fetching · 66443ee7
  Arne Stabenau authored 21 years ago
  
  66443ee7
- unused · d6b5b866
  Simon Potter authored 21 years ago
  
  d6b5b866