Removed OMIM for now. As the same acc can have more than one disorder and only one can be stored. So disease database still needed for now

match only translation for hugo until mart can handle translations and transcripts. Transcript code commented out for now

Fixed bug that was causing a small number of HUGO xrefs to have null labels (hence xref displayed was numeric HGNC instead).

Added a use Bio::EnsEMBL::Utils::Exception statement as some of the method e.g throw from this module are used

Added command-line options to myisamchk (as suggested by Tim Cutts) to improve performance and only actually run myisamchk if it's required.

Added note to usage about it being best to run it on the actual cluster node that the MySQL instance is running on.

Now can parse a locator with space character in it. Needed as when using Registry with multiple species one needs to specify e.g. -species "Homo sapiens"

1. Use double-fork (not Open3) to communicate with LSF processes. More reliable and no quoting strangeness.

2. Add option to automatically upload external_db table

3. Bug fix: transcript/gene display_xrefs were not incorporating RefSeq xrefs since the split into RefSeq_peptide and RefSeq_dna had not been taken into account in the display xref calculation.

Use double-fork (not Open3) to communicate with LSF processes. More reliable and no quoting strangeness.