Commits · 4bccb1da26c3a81431715c611dd5161b3372dfee · ensembl-gh-mirror / ensembl

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Sep 01, 2011
- Remove internal one-off script. · 4bccb1da
  Andreas Kusalananda Kähäri authored 13 years ago
  
  4bccb1da
- Remove old unused script. · 5e54877a
  Andreas Kusalananda Kähäri authored 13 years ago
  
  5e54877a
- Removed. · a6de3cdb
  Andreas Kusalananda Kähäri authored 13 years ago
  
  a6de3cdb
- Fix comment so that it says 'patch_63_64_d.sql' instead of 'patch_63_64_c.sql'. · 3f54dd74
  Andreas Kusalananda Kähäri authored 13 years ago
  
  3f54dd74
- Modify ontology_xref.linkage_type so that it's DEFAULT NULL, as it says · 21040ed0
  Andreas Kusalananda Kähäri authored 13 years ago
```
in the patch (patch_63_64_d.sql).

Also delete spaces at end of lines.
```
  21040ed0
Aug 22, 2011
- Added foreign keys to operon tables. · 78bdc120
  Monika Komorowska authored 13 years ago
  
  78bdc120
- Added description for is_ref column in alt_allele table · a31c0dd1
  Monika Komorowska authored 13 years ago
  
  a31c0dd1
- Moved new operon tables to the fundamental tables section. · 1ec4047f
  Monika Komorowska authored 13 years ago
  
  1ec4047f
Aug 17, 2011

Due to a bug in MySQL we need to drop the unique index, change the field to... · 662ca185

Andy Yates authored 13 years ago

Due to a bug in MySQL we need to drop the unique index, change the field to varchar then reaply the index otherwise latin1 encodings can cause a constraint error to occur. This only affects the conversion of enum to varchar

662ca185

Aug 15, 2011
- added docs for operon-related tables · 65d14b7f
  Dan Staines authored 13 years ago
  
  65d14b7f
Aug 11, 2011
- Change to field linkage_type in ontology_xref · 531b4a97
  Monika Komorowska authored 13 years ago
  
  531b4a97
- Changed field linkage_type to varchar(3) instead of enum. · 1a218acb
  Monika Komorowska authored 13 years ago
```
Values will be tested in healthchecks.
```
  1a218acb
Aug 10, 2011
- tables with same names exist in other schemas and may create collision · 2ebe6b3a
  Leo Gordon authored 13 years ago
  
  2ebe6b3a
Aug 05, 2011
- Removed empty documentation tags (that might confuse the sql2html.pl script). · fb4878f5
  Andreas Kusalananda Kähäri authored 13 years ago
  
  fb4878f5
Aug 04, 2011
- Modify the static meta table data for patches in release 64, and update · 988d905a
  Andreas Kusalananda Kähäri authored 13 years ago
```
schema version to 64 too.
```
  988d905a
Jul 21, 2011
- ensembl_object_type column is not null · 853ff6d3
  Magali Ruffier authored 13 years ago
  
  853ff6d3
Jul 20, 2011
- added is)ref to alt_allele table to say which is the reference allele · 50aecca5
  Ian Longden authored 13 years ago
  
  50aecca5
- patch to bring in operon model tables · 7b05e45f
  Dan Staines authored 13 years ago
  
  7b05e45f
Jul 13, 2011
- Added support to schema and API for operons · f03911f4
  Dan Staines authored 13 years ago
  
  f03911f4
Jul 06, 2011
- · 453bd347
  Monika Komorowska authored 13 years ago
```
Update schema version.
```
  453bd347
Jun 27, 2011
- Updated patch identifiers in the meta table. · df1115b1
  Monika Komorowska authored 13 years ago
  
  df1115b1
Jun 01, 2011
- Linked xrefs to genes for 3 more external dbs. · 11a550ad
  Monika Komorowska authored 13 years ago
  
  11a550ad
May 23, 2011
- Updated link to xref schema pdf. · 540d4a30
  Monika Komorowska authored 13 years ago
  
  540d4a30
May 13, 2011
- SQL to change stable_id_idx to non unique for gene, exon, transcript and... · ff771c25
  Monika Komorowska authored 13 years ago
```
SQL to change stable_id_idx to non unique for gene, exon, transcript and translation stable_is tables.
```
  ff771c25
- Delated UNIQUE INDEX on stable_id, version from exon, gene, translation and... · b755198f
  Monika Komorowska authored 13 years ago
```
Delated UNIQUE INDEX on stable_id, version from exon, gene, translation and transcript stable_id tables.
```
  b755198f
- Deleted unique index on stable_id, version from tables exon, gene, translation... · a3b6359b
  Monika Komorowska authored 13 years ago
```
Deleted unique index on stable_id, version from tables exon, gene, translation and transcript stable id.
```
  a3b6359b
May 11, 2011
- Corrected syntax · 90acdec1
  Monika Komorowska authored 13 years ago
  
  90acdec1
- Small script to increment the version number of entries in the gene_stable_id... · 5d6b6acf
  Rhoda Kinsella authored 13 years ago
```
Small script to increment the version number of entries in the gene_stable_id table in the human rnaseq database that have the same stable_id
```
  5d6b6acf
May 10, 2011
- match table.sql and pacth to be exactly the same · 073423e5
  Ian Longden authored 13 years ago
  
  073423e5
- Added patch identifier · 8e04c4e0
  Monika Komorowska authored 13 years ago
  
  8e04c4e0
May 09, 2011
- Fix bug with MODIFY and anal_idx · 8b713994
  Thibaut Hourlier authored 13 years ago
  
  8b713994
- Stored procedure to delete duplicates from table unmapped_object. · cfb85580
  Monika Komorowska authored 13 years ago
  
  cfb85580
May 06, 2011
- Changes for patches 62_63 a, b and c · 91aa9a30
  Monika Komorowska authored 13 years ago
  
  91aa9a30
- *** empty log message *** · 18632430
  Monika Komorowska authored 13 years ago
  
  18632430
- Applied changes for patches a,b,c for release 63. · df1b30ee
  Monika Komorowska authored 13 years ago
  
  df1b30ee
May 03, 2011
- Update schema version. · e051f2ea
  Monika Komorowska authored 13 years ago
  
  e051f2ea
Apr 28, 2011
- Stored procedure to link xrefs to genes, instead of transcripts or translations. · 3461014e
  Monika Komorowska authored 13 years ago
  
  3461014e
Apr 11, 2011
- Remove field dbprimary_acc_linkable from external_db table. · 5d9b6352
  Monika Komorowska authored 13 years ago
  
  5d9b6352
- ndexing changes for stable ids. · 229d2618
  Monika Komorowska authored 13 years ago
  
  229d2618
- Update schema version · de6d6ae6
  Monika Komorowska authored 13 years ago
  
  de6d6ae6