Clarified source ID for derived GO terms.

Fix to SQL for storing dependent xrefs as part of large graphs, sometimes wouldn't store linkage annotation (e.g. GO evidence code).

download_dir can be specified using options in xref_parser.pl

fix added ; now checks nr of entries in object_xref table as well before throwing

option -download_dir added to specify dir where the files are downloaded to

Added support for optionally projecting features to a different co-ordinate system before loading. UNTESTED (no data yet)

ciona savi source edited

ciona savignyi added

MIM now needs three files the genemap file to get the list of valis gene numbers, the morbidmap fiel to get a list of valid morbid map number and omim.txt to get the descriptions etc for both

get_all_Genes causing $load_transcripts flag to be misinterpreted as
the dbtype