Commits · a55bab23c875cc529986281f72830fb91d4ffec1 · ensembl-gh-mirror / ensembl

This project is mirrored from https://:*****@github.com/Ensembl/ensembl.git. Pull mirroring failed 2 months ago.
Repository mirroring has been paused due to too many failed attempts. It can be resumed by a project maintainer or owner.
Last successful update 6 months ago.

May 24, 2004
- allow debug method to take list of args · 3d30965f
  Graham McVicker authored 20 years ago
  
  3d30965f
May 21, 2004
- added tests for TranscriptMapper in conjunction with SeqEdits · 78dfdb5b
  Graham McVicker authored 20 years ago
  
  78dfdb5b
May 18, 2004
- modified selenocystein tests to reflect changed implementation · 927895f0
  Graham McVicker authored 20 years ago
  
  927895f0
- added tests for new SeqEdit class · 8bc56931
  Graham McVicker authored 20 years ago
  
  8bc56931
- added some more tests, and modified existing tests related to mrna editing · 8c3a3aa8
  Graham McVicker authored 20 years ago
  
  8c3a3aa8
May 13, 2004
- corrected test count · ec746187
  Arne Stabenau authored 20 years ago
  
  ec746187
- added tables transcript_attrib trnaslation_attrib · 8ed5be31
  Arne Stabenau authored 20 years ago
  
  8ed5be31
May 11, 2004
- tests for transcript and translation attributes · b0359c7d
  Arne Stabenau authored 20 years ago
  
  b0359c7d
May 06, 2004
- some get_all_alt_location testing · 6ce01ebc
  Arne Stabenau authored 20 years ago
  
  6ce01ebc
Apr 27, 2004
- added test for new seq_region_Slice method · 7a8d5033
  Graham McVicker authored 20 years ago
  
  7a8d5033
Apr 23, 2004
- added some tests for new get_all_alt_locations method · 63f98caa
  Graham McVicker authored 20 years ago
  
  63f98caa
Apr 21, 2004
- added test for fetch_by_dbID · d354c1c6
  Graham McVicker authored 20 years ago
  
  d354c1c6
- corrected incorrect meta_coord and assembly_exception test data · 7d33c0ec
  Graham McVicker authored 20 years ago
  
  7d33c0ec
Apr 06, 2004
- save state of align feature tables before testing remove method · cdd9ca8d
  Graham McVicker authored 21 years ago
  
  cdd9ca8d
Apr 01, 2004
- fix to dbConnection test · 5fdfc8fc
  Graham McVicker authored 21 years ago
  
  5fdfc8fc
Mar 31, 2004
- added tests for new MetaCoordContainer object · b51fa097
  Graham McVicker authored 21 years ago
  
  b51fa097
Mar 29, 2004
- updated test for slightly modified magic disconnection logic · 9ee670ce
  Graham McVicker authored 21 years ago
  
  9ee670ce
- updated test for changed RepeatFeatureAdaptor method · 4c845984
  Graham McVicker authored 21 years ago
  
  4c845984
Mar 19, 2004
- more tests for remove methods for genes, transcripts, exons, translations etc. · 910024d0
  Graham McVicker authored 21 years ago
  
  910024d0
- added tests for object_xref deletion · 32c5c651
  Graham McVicker authored 21 years ago
  
  32c5c651
Mar 18, 2004
- added count_rows utility function · 20af7ce3
  Arne Stabenau authored 21 years ago
  
  20af7ce3
- added remove test, doesnt check all the removals jet, · d61de6cc
  Arne Stabenau authored 21 years ago
```
just gene, transcript, and exon table;
```
  d61de6cc
Mar 16, 2004
- added regression test: gene end was not always correctly set by recalculate coordinates · 481d2872
  Graham McVicker authored 21 years ago
  
  481d2872
- turned off verbosity · 47accb42
  Graham McVicker authored 21 years ago
  
  47accb42
- added tests for magical DBConnection disconnect_when_inactive flag · 2ca72595
  Graham McVicker authored 21 years ago
  
  2ca72595
Mar 15, 2004
- updated test database · a8265e5c
  Arne Stabenau authored 21 years ago
  
  a8265e5c
- modified tests for repeat_consensus type column · def0881f
  Arne Stabenau authored 21 years ago
  
  def0881f
- Removed ProxyGene and ProxyRepeatFeature adaptors - should no longer be needed. · b08167c4
  Graham McVicker authored 21 years ago
  
  b08167c4
Mar 11, 2004
- avoid perl warning · 7eceeb73
  Graham McVicker authored 21 years ago
  
  7eceeb73
Mar 10, 2004
- added some tests for dbhandle sharing · 1c647a20
  Graham McVicker authored 21 years ago
  
  1c647a20
- added disconnect method. smart enough to deal with shared db_handles · 549e6b9a
  Jessica Severin authored 21 years ago
```
'reconnect' is automatic when any access to the handle (db_handle, prepare)
is requested. Also added explicit connect method which returns if the
handle is already connected (shouldn't need to be called)
```
  549e6b9a
Mar 08, 2004
- added tests for fetch_by_region which can now "guess" coordinate system if one is not provided · e8aaf313
  Graham McVicker authored 21 years ago
  
  e8aaf313
Mar 03, 2004
- adjusted for changed meta data in test db · 071c012a
  Graham McVicker authored 21 years ago
  
  071c012a
- duplicate keys were present in meta table of testdb · 05e51da0
  Graham McVicker authored 21 years ago
  
  05e51da0
Mar 02, 2004
- updated test meta table to provide explicit assembly mappings · 2796e77b
  Graham McVicker authored 21 years ago
  
  2796e77b
- hide/restore meta_coord table so test db state is preserved after test feature stores · eff60462
  Graham McVicker authored 21 years ago
  
  eff60462
Mar 01, 2004
- removed tests for attrib functions which have been moved to AttributeAdaptor from SliceAdaptor · 8b27ca5d
  Graham McVicker authored 21 years ago
  
  8b27ca5d
- set_seq_region_attrib is gone, use store_on_Slice in AttributeAdaptor now · dbbb6663
  Arne Stabenau authored 21 years ago
  
  dbbb6663
- fixed some warnings/test errors · 5f2e184a
  Graham McVicker authored 21 years ago
  
  5f2e184a
- fixed test count · b096923c
  Graham McVicker authored 21 years ago
  
  b096923c