Commits · ad6713ec2b33b92c771c545eec377c39158b5f09 · ensembl-gh-mirror / ensembl

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Aug 15, 2005
- external_db_id values changed · ad6713ec
  Ian Longden authored 19 years ago
  
  ad6713ec
- removed delete if exist bit which was casung problems · 1da9cf5c
  Ian Longden authored 19 years ago
  
  1da9cf5c
- Mapper methods basically all set to be stable. · cb07a114
  Ian Longden authored 19 years ago
  
  cb07a114
Aug 12, 2005
- status reports added plus some tiding up of docs. Two small sections still to be done · 8042c98b
  Ian Longden authored 19 years ago
  
  8042c98b
- status reports added plus some tiding up of docs · d1b8f7f5
  Ian Longden authored 19 years ago
  
  d1b8f7f5
- ALL methods now deprecated. This Module will be removed soon · e8af8aa2
  Ian Longden authored 19 years ago
  
  e8af8aa2
- check for arguments as all of Root.pm methods now deprecate to one of these method · 89f5d751
  Ian Longden authored 19 years ago
  
  89f5d751
Aug 11, 2005
- Bug fix to gene display_xref setting. · 1ecd6c11
  Glenn Proctor authored 19 years ago
  
  1ecd6c11
- Don't clobber ncRNA display_xrefs · 8150cd5c
  Glenn Proctor authored 19 years ago
  
  8150cd5c
Aug 09, 2005
- ciona_int_aniseed --> aniseed · 3319f854
  Jan-hinnerk Vogel authored 19 years ago
  
  3319f854
- db_names for ciona int aniseed and jgi changed · ec26e3c3
  Jan-hinnerk Vogel authored 19 years ago
  
  ec26e3c3
- if option -useexstingmapping is used, · 0de55c31
  Jan-hinnerk Vogel authored 19 years ago
```
sequence will not be dumped out now.
```
  0de55c31
- use rusage to make sure there is enough disk space. lsrcp now uses ecs2c as... · b5dba425
  Ian Longden authored 19 years ago
```
use rusage to make sure there is enough disk space. lsrcp now uses ecs2c as the host machine for coping etc to protect NFS. Make sure number of jobs is greater than 1 else arrays dont like it
```
  b5dba425
Aug 08, 2005
- Typo. · d6ebb9e4
  Craig Melsopp authored 19 years ago
  
  d6ebb9e4
- Added entry for microarray HC_G11. · 6adfab11
  Craig Melsopp authored 19 years ago
  
  6adfab11
- Added db_display_name for new affy arrays. · b88ce2af
  Craig Melsopp authored 19 years ago
  
  b88ce2af
- Added entries for new microarrays: HuGeneFL, DrosGenome1, Drosophila_2. · 7c8e35d9
  Craig Melsopp authored 19 years ago
  
  7c8e35d9
- Avoid deleting or overwriting ncRNA gene descriptions. · 1f8bcff2
  Glenn Proctor authored 19 years ago
  
  1f8bcff2
- now up to schema 33 · 45dc3665
  Steve Trevanion authored 19 years ago
  
  45dc3665
- Added xref.timestamp to meta table when -upload is used. Untested ... · 11c740d0
  Glenn Proctor authored 19 years ago
  
  11c740d0
- changed behavior to not merge the resuts for hashes but to return an array of hashes. · 3512b246
  Ian Longden authored 19 years ago
  
  3512b246
Aug 05, 2005
- made changes for archive site · 5d048a92
  Fiona Cunningham authored 19 years ago
  
  5d048a92
- new merged adaptor needs species and type · 639ed3af
  Ian Longden authored 19 years ago
  
  639ed3af
Aug 04, 2005
- type hash was being overwritten, so replaced · 18cf32d0
  Ian Longden authored 19 years ago
  
  18cf32d0
- only use refseqs, ignore embl etc · dc90e8a7
  Ian Longden authored 19 years ago
  
  dc90e8a7
Aug 03, 2005
- changes to external_db_id entrys 2601 / 2602 for xref to Aniseed and JGI · 8d76048a
  Jan-hinnerk Vogel authored 19 years ago
  
  8d76048a
- more checks done now on the mapping files · 481378f8
  Ian Longden authored 19 years ago
  
  481378f8
Aug 02, 2005
- fixed err file checking and added check for the nu,bre of map files · 4e94d2ad
  Ian Longden authored 19 years ago
  
  4e94d2ad
- Added db_display_name fetching to _fetch_all_by_obj · 5f6eb75d
  Glenn Proctor authored 19 years ago
  
  5f6eb75d
- Added db_display_name · 754a708d
  Glenn Proctor authored 19 years ago
  
  754a708d
- Added new db_display_name column to external_db · f7e7bd6a
  Glenn Proctor authored 19 years ago
  
  f7e7bd6a
- Added friendly display name for database. Removed some unused external_dbs. · 1eb1f5bd
  Glenn Proctor authored 19 years ago
  
  1eb1f5bd
- Patch for 32-33 · ba77538c
  Glenn Proctor authored 19 years ago
  
  ba77538c
- Added db_display_name · 900c1050
  Glenn Proctor authored 19 years ago
  
  900c1050
- Added support for new db_display_name column. · a3b34a83
  Glenn Proctor authored 19 years ago
  
  a3b34a83
- Renamed external_db.display_label to db_display_name to distinguish it from... · 41512af6
  Glenn Proctor authored 19 years ago
```
Renamed external_db.display_label to db_display_name to distinguish it from similarly-named column in xref.
```
  41512af6
Aug 01, 2005
- Unigene moved directorys · e8369095
  Ian Longden authored 19 years ago
  
  e8369095
- Made warning about existence of .err files more visible. · 57dd2ff2
  Glenn Proctor authored 19 years ago
  
  57dd2ff2
Jul 29, 2005
- merged from branch-ensembl-32 · 338a5e3c
  Web Admin authored 19 years ago
  
  338a5e3c
- Added support for storing associated Ensembl objects in store() method. · e472227a
  Glenn Proctor authored 19 years ago
  
  e472227a